(Q35926212)

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Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.

scientific article published on 19 June 2015

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26091701%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways (English)

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17 February 2020

circadian rhythm

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17 February 2020

Hirofumi Nakagami

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17 February 2020

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Mani Kant Choudhary

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17 February 2020

Yuko Nomura

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17 February 2020

David E Somers

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17 February 2020

Molecular & Cellular Proteomics

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17 February 2020

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17 February 2020

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Regulation of plant NR activity by reversible phosphorylation, 14-3-3 proteins and proteolysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

A hierarchical unsupervised growing neural network for clustering gene expression patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Orchestrated transcription of key pathways in Arabidopsis by the circadian clock

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Arabidopsis basic leucine zipper transcription factors involved in an abscisic acid-dependent signal transduction pathway under drought and high-salinity conditions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

The protein kinase CK2 is involved in regulation of circadian rhythms in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Protein kinase CK2 interacts with and phosphorylates the Arabidopsis circadian clock-associated 1 protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Resonating circadian clocks enhance fitness in cyanobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Evolutionary analyses of the 12-kDa acidic ribosomal P-proteins reveal a distinct protein of higher plant ribosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Quantitative analysis of Drosophila period gene transcription in living animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Identification in vitro of a post-translational regulatory site in the hinge 1 region of Arabidopsis nitrate reductase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

Dephosphorylation of photosystem II core proteins is light-regulated in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

2 October 2017

EARLY FLOWERING4 recruitment of EARLY FLOWERING3 in the nucleus sustains the Arabidopsis circadian clock

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

27 July 2018

Temporal repression of core circadian genes is mediated through EARLY FLOWERING 3 in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

27 July 2018

PYR/PYL/RCAR family members are major in-vivo ABI1 protein phosphatase 2C-interacting proteins in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

27 July 2018

Nitrate-reductase expression is under the control of a circadian rhythm and is light inducible in Nicotiana tabacum leaves

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Arabidopsis CURVATURE THYLAKOID1 proteins modify thylakoid architecture by inducing membrane curvature.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

CLC-b-mediated NO-3/H+ exchange across the tonoplast of Arabidopsis vacuoles.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Chloroplast DnaJ-like proteins 3 and 4 (CDJ3/4) from Chlamydomonas reinhardtii contain redox-active Fe-S clusters and interact with stromal HSP70B.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Proteomic analysis reveals the role of synaptic vesicle cycling in sustaining the suprachiasmatic circadian clock

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

The Arabidopsis nitrate transporter NRT1.7, expressed in phloem, is responsible for source-to-sink remobilization of nitrate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Ser/Thr/Tyr phosphoproteome analysis of pathogenic and non-pathogenic Pseudomonas species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

The DIURNAL project: DIURNAL and circadian expression profiling, model-based pattern matching, and promoter analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Comparative transcriptome of diurnally oscillating genes and hormone-responsive genes in Arabidopsis thaliana: insight into circadian clock-controlled daily responses to common ambient stresses in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

The Arabidopsis circadian clock incorporates a cADPR-based feedback loop.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

PRR3 Is a vascular regulator of TOC1 stability in the Arabidopsis circadian clock

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

FLOWERING LOCUS C mediates natural variation in the high-temperature response of the Arabidopsis circadian clock.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

ELF4 is a phytochrome-regulated component of a negative-feedback loop involving the central oscillator components CCA1 and LHY.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Characterization of circadian-associated APRR3 pseudo-response regulator belonging to the APRR1/TOC1 quintet in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

ABA activates ADPR cyclase and cADPR induces a subset of ABA-responsive genes in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Phytohormones participate in an S6 kinase signal transduction pathway in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Trypsin cleaves exclusively C-terminal to arginine and lysine residues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

The F-box protein ZEITLUPE confers dosage-dependent control on the circadian clock, photomorphogenesis, and flowering time.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Identification of three previously unknown in vivo protein phosphorylation sites in thylakoid membranes of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Phosphorylation of the D1 photosystem II reaction center protein is controlled by an endogenous circadian rhythm.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Circadian rhythms confer a higher level of fitness to Arabidopsis plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Water transport activity of the plasma membrane aquaporin PM28A is regulated by phosphorylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Identification of the major regulatory phosphorylation site in sucrose-phosphate synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Circadian oscillation of nitrate reductase activity in Gonyaulax polyedra is due to changes in cellular protein levels.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

24 September 2018

Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

14 November 2018

ELF4 is required for oscillatory properties of the circadian clock

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528250

14 November 2018

Circadian dysfunction causes aberrant hypocotyl elongation patterns in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chilling delays circadian pattern of sucrose phosphate synthase and nitrate reductase activity in tomato

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Circadian Regulation of Sucrose Phosphate Synthase Activity in Tomato by Protein Phosphatase Activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The ELF4 gene controls circadian rhythms and flowering time in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Circadian waves of expression of the APRR1/TOC1 family of pseudo-response regulators in Arabidopsis thaliana: insight into the plant circadian clock

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhanced fitness conferred by naturally occurring variation in the circadian clock

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of Arabidopsis leaf hydraulics involves light-dependent phosphorylation of aquaporins in veins

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

StageTip-based HAMMOC, an efficient and inexpensive phosphopeptide enrichment method for plant shotgun phosphoproteomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for light-dependent and light-independent protein dephosphorylation in chloroplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein phosphorylation as a mechanism for regulation of spinach leaf sucrose-phosphate synthase activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhancer trapping reveals widespread circadian clock transcriptional control in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The nitrate/proton antiporter AtCLCa mediates nitrate accumulation in plant vacuoles

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Auxin stimulates S6 ribosomal protein phosphorylation in maize thereby affecting protein synthesis regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein phosphorylation as a mechanism for osmotic-stress activation of sucrose-phosphate synthase in spinach leaves

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Circadian and light-regulated expression of nitrate reductase in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential expression of the two Arabidopsis nitrate reductase genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/26091701

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/MCP.M114.047183

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26091701%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26091701%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26091701%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

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