(Q35927149)

11 August 2017

GeneTIER: prioritization of candidate disease genes using tissue-specific gene expression profiles (English)

1 reference

11 August 2017

1 reference

6

David T Bonthron

0 references

Ian M. Carr

7

object named as

Ian M Carr

0 references

Alexander Markham

4

object named as

Alexander F Markham

0 references

Christopher M Watson

object named as

Christopher M Watson

5

0 references

author name string

Agne Antanaviciute

1

1 reference

11 August 2017

Catherine Daly

2

1 reference

11 August 2017

Laura A Crinnion

3

1 reference

11 August 2017

language of work or name

English

0 references

publication date

9 April 2015

1 reference

full work available at URL

11 August 2017

http://eprints.whiterose.ac.uk/88507/

content deliverer

White Rose Research Online

copyright license

Creative Commons Attribution 4.0 International

0 references

published in

Bioinformatics

1 reference

11 August 2017

31

1 reference

11 August 2017

16

1 reference

11 August 2017

2728-2735

1 reference

Creative Commons Attribution 4.0 International

11 August 2017

start time

2 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

Linking tissues to phenotypes using gene expression profiles

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

Construction and accessibility of a cross-species phenotype ontology along with gene annotations for biomedical research

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

RefSeq: an update on mammalian reference sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

PhenoDigm: analyzing curated annotations to associate animal models with human diseases

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

Genenames.org: the HGNC resources in 2013

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

GeneFriends: an online co-expression analysis tool to identify novel gene targets for aging and complex diseases.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

RNA-Seq Atlas--a reference database for gene expression profiling in normal tissue by next-generation sequencing.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

In silico gene prioritization by integrating multiple data sources

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

PINTA: a web server for network-based gene prioritization from expression data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

A guide to web tools to prioritize candidate genes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

Entrez Gene: gene-centered information at NCBI

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

Interoperability between phenotype and anatomy ontologies

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

ToppGene Suite for gene list enrichment analysis and candidate gene prioritization

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

GeneDistiller--distilling candidate genes from linkage intervals

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

NCBI GEO: archive for high-throughput functional genomic data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

Key issues in conducting a meta-analysis of gene expression microarray datasets

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

CANDID: a flexible method for prioritizing candidate genes for complex human traits.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

ENDEAVOUR update: a web resource for gene prioritization in multiple species

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

The foundational model of anatomy in OWL: Experience and perspectives

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

The Mouse Genome Database (MGD): mouse biology and model systems

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

CGI: a new approach for prioritizing genes by combining gene expression and protein-protein interaction data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

ArrayExpress: a public database of gene expression data at EBI.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

The UCSC Table Browser data retrieval tool

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

BioMart: driving a paradigm change in biological data management

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

TOM: enhancement and extension of a tool suite for in silico approaches to multigenic hereditary disorders.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528628

Multiple-laboratory comparison of microarray platforms

24 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTV196

An unbiased evaluation of gene prioritization tools

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25861967

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTV196

1 reference

10.1093/BIOINFORMATICS/BTV196

11 August 2017

0 references

DBLP publication ID

journals/bioinformatics/AntanaviciuteDC15

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

11 August 2017

PubMed publication ID

25861967

1 reference