(Q35968493)

11 August 2017

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title

The double-stranded-RNA-binding motif: interference and much more (English)

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11 August 2017

Bin Tian

1

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author name string

Philip C Bevilacqua

series ordinal

2

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11 August 2017

Amy Diegelman-Parente

series ordinal

3

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11 August 2017

Michael B Mathews

series ordinal

4

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11 August 2017

language of work or name

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1 December 2004

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Nature Reviews Molecular Cell Biology

11 August 2017

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11 August 2017

5

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11 August 2017

1013-1023

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11 August 2017

12

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https://scigraph.springernature.com/pub.10.1038/nrm1528

11 August 2017

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Minor-groove recognition of double-stranded RNA by the double-stranded RNA-binding domain from the RNA-activated protein kinase PKR.

21 January 2018

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dsRBM1 and a proline-rich domain of RNA helicase A can form a composite binder to recognize a specific dsDNA

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Binding of the protein kinase PKR to RNAs with secondary structure defects: role of the tandem A-G mismatch and noncontiguous helixes

21 January 2018

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The binding site of the RNA-dependent protein kinase (PKR) on EBER1 RNA from Epstein-Barr virus

21 January 2018

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Expanded CUG repeat RNAs form hairpins that activate the double-stranded RNA-dependent protein kinase PKR

21 January 2018

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Human interferon-gamma mRNA autoregulates its translation through a pseudoknot that activates the interferon-inducible protein kinase PKR

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Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans

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A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans

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Straightening of bulged RNA by the double-stranded RNA-binding domain from the protein kinase PKR.

21 January 2018

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Identification of novel genes coding for small expressed RNAs

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An extensive class of small RNAs in Caenorhabditis elegans

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21 January 2018

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Substrate recognition by a eukaryotic RNase III: the double-stranded RNA-binding domain of Rnt1p selectively binds RNA containing a 5'-AGNN-3' tetraloop

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Evaluation of the RNA determinants for bacterial and yeast RNase III binding and cleavage.

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Intrinsic double-stranded-RNA processing activity of Escherichia coli ribonuclease III lacking the dsRNA-binding domain

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Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria

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Functional characterization of and cooperation between the double-stranded RNA-binding motifs of the protein kinase PKR.

21 January 2018

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PACT, a protein activator of the interferon-induced protein kinase, PKR.

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Modular structure of PACT: distinct domains for binding and activating PKR

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Distinct roles of two conserved Staufen domains in oskar mRNA localization and translation

21 January 2018

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Thirty-three years later, a glimpse at the ribonuclease III active site.

21 January 2018

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Role for a bidentate ribonuclease in the initiation step of RNA interference

21 January 2018

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A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA

21 January 2018

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A novel type of RNase III family proteins in eukaryotes

21 January 2018

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The nuclear RNase III Drosha initiates microRNA processing

21 January 2018

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R2D2, a Bridge Between the Initiation and Effector Steps of the Drosophila RNAi Pathway

21 January 2018

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The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans

21 January 2018

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Antiviral actions of interferons

21 January 2018

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Adenosine deaminases acting on RNA (ADARs): RNA-editing enzymes

21 January 2018

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Systematic identification of abundant A-to-I editing sites in the human transcriptome

21 January 2018

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Selective stimulation of translational expression by Alu RNA.

21 January 2018

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Induction and suppression of RNA silencing by an animal virus

21 January 2018

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RNA silencing of dengue virus type 2 replication in transformed C6/36 mosquito cells transcribing an inverted-repeat RNA derived from the virus genome

21 January 2018

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Specificity of short interfering RNA determined through gene expression signatures

21 January 2018

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Genomewide view of gene silencing by small interfering RNAs

21 January 2018

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Activation of the interferon system by short-interfering RNAs

21 January 2018

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Nonspecific, concentration-dependent stimulation and repression of mammalian gene expression by small interfering RNAs (siRNAs).

21 January 2018

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Evidence that vaccinia virulence factor E3L binds to Z-DNA in vivo: Implications for development of a therapy for poxvirus infection

21 January 2018

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Mutations in RNAi rescue aberrant chemotaxis of ADAR mutants

21 January 2018

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RNAi is antagonized by A-->I hyper-editing

21 January 2018

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The RNA binding protein nuclear factor 90 functions as both a positive and negative regulator of gene expression in mammalian cells

21 January 2018

1 reference

Transcription repression of human hepatitis B virus genes by negative regulatory element-binding protein/SON

21 January 2018

1 reference

Constitutive silencing of IFN-beta promoter is mediated by NRF (NF-kappaB-repressing factor), a nuclear inhibitor of NF-kappaB

21 January 2018

1 reference

RNA helicase A interacts with dsDNA and topoisomerase IIalpha

21 January 2018

1 reference

staufen, a gene required to localize maternal RNAs in the Drosophila egg

21 January 2018

1 reference

The staufen/pumilio pathway is involved in Drosophila long-term memory.

21 January 2018

1 reference

Isolation and characterization of Staufen-containing ribonucleoprotein particles from rat brain

21 January 2018

1 reference

Dynamic association of RNA-editing enzymes with the nucleolus

21 January 2018

1 reference

Modulation of RNA editing by functional nucleolar sequestration of ADAR2

21 January 2018

1 reference

Purification and activation of the double-stranded RNA-dependent eIF-2 kinase DAI

21 January 2018

1 reference

Activities of adenovirus virus-associated RNAs: purification and characterization of RNA binding proteins

21 January 2018

1 reference

Xlrbpa, a double-stranded RNA-binding protein associated with ribosomes and heterogeneous nuclear RNPs

21 January 2018

1 reference

The human but not the Xenopus RNA-editing enzyme ADAR1 has an atypical nuclear localization signal and displays the characteristics of a shuttling protein

21 January 2018

1 reference

Nuclear export of NF90 is required for interleukin-2 mRNA stabilization

21 January 2018

1 reference

CRM1 mediates the export of ADAR1 through a nuclear export signal within the Z-DNA binding domain

21 January 2018

1 reference

Subcellular distribution of ADAR1 isoforms is synergistically determined by three nuclear discrimination signals and a regulatory motif

21 January 2018

1 reference

Exportin-5, a novel karyopherin, mediates nuclear export of double-stranded RNA binding proteins

21 January 2018

1 reference

Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs

21 January 2018

1 reference

Nuclear export of microRNA precursors

21 January 2018

1 reference

Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs

21 January 2018

1 reference

Exp5 exports eEF1A via tRNA from nuclei and synergizes with other transport pathways to confine translation to the cytoplasm

21 January 2018

1 reference

The brain-specific double-stranded RNA-binding protein Staufen2: nucleolar accumulation and isoform-specific exportin-5-dependent export

21 January 2018

1 reference

The double-stranded RNA-binding protein X1rbpa promotes RNA strand annealing.

21 January 2018

1 reference

Phosphorylation of the RNA-dependent protein kinase regulates its RNA-binding activity

21 January 2018

1 reference

A structural basis for recognition of A.T and T.A base pairs in the minor groove of B-DNA

21 January 2018

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Hydrogen bonding, base stacking, and steric effects in dna replication

21 January 2018

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21 January 2018

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Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

21 January 2018

1 reference

RNA interference in protozoan parasites

21 January 2018

1 reference

MicroRNAs: genomics, biogenesis, mechanism, and function

21 January 2018

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Thermodynamics of base pairing

21 January 2018

1 reference

Hierarchy and dynamics of RNA folding

21 January 2018

1 reference

21 January 2018

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HMM Logos for visualization of protein families

21 January 2018

1 reference

Induction of an interferon response by RNAi vectors in mammalian cells

21 January 2018

1 reference

21 January 2018

Protein-RNA recognition

1 reference

Conserved structures and diversity of functions of RNA-binding proteins

31 March 2020

1 reference

31 March 2020

RNA-protein complexes

1 reference

A conserved double-stranded RNA-binding domain

31 March 2020

1 reference

Structure of the dsRNA binding domain of E. coli RNase III.

31 March 2020

1 reference

NMR solution structure of a dsRNA binding domain from Drosophila staufen protein reveals homology to the N-terminal domain of ribosomal protein S5

31 March 2020

1 reference

Persistence length of RNA

31 March 2020

1 reference

Translational control by the Epstein-Barr virus small RNA EBER-1. Reversal of the double-stranded RNA-induced inhibition of protein synthesis in reticulocyte lysates

31 March 2020

1 reference

Molecular dynamics simulation of the RNA complex of a double-stranded RNA-binding domain reveals dynamic features of the intermolecular interface and its hydration

31 March 2020

1 reference

Phylogenetics and functions of the double-stranded RNA-binding motif: a genomic survey.

31 March 2020

1 reference

Function, mechanism and regulation of bacterial ribonucleases

31 March 2020

1 reference

The Minimal Gene Complement of Mycoplasma genitalium

31 March 2020

1 reference

Major groove accessibility of RNA

31 March 2020

1 reference

Sequence-specific recognition of double helical nucleic acids by proteins

31 March 2020

1 reference

Signal integration via PKR.

31 March 2020

1 reference

inferred from DOI database lookup

7 January 2021

based on heuristic

The E3L and K3L vaccinia virus gene products stimulate translation through inhibition of the double-stranded RNA-dependent protein kinase by different mechanisms

1 reference

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NRM1528

1 reference

Dimensions Publication ID

11 August 2017

0 references

1 reference