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BAGEL: a computational framework for identifying essential genes from pooled library screens.
scientific article
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
title
BAGEL: a computational framework for identifying essential genes from pooled library screens
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
main subject
software framework
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inferred from title
author
Traver Hart
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
Jason Moffat
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
author name string
Traver Hart
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
retrieved
11 August 2017
Jason Moffat
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
retrieved
11 August 2017
language of work or name
English
1 reference
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publication date
16 April 2016
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
published in
BMC Bioinformatics
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
volume
17
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
page(s)
164
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
exact match
https://scigraph.springernature.com/pub.10.1186/s12859-016-1015-8
0 references
cites work
High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4833918
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2 October 2017
Identification and characterization of essential genes in the human genome.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4833918
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2 October 2017
ScreenBEAM: a novel meta-analysis algorithm for functional genomics screens via Bayesian hierarchical modeling
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2 October 2017
A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks
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2 October 2017
Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis
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2 October 2017
MAGeCK enables robust identification of essential genes from genome-scale CRISPR/Cas9 knockout screens
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PubMed Central
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2 October 2017
Measuring error rates in genomic perturbation screens: gold standards for human functional genomics
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2 October 2017
Genome-wide recessive genetic screening in mammalian cells with a lentiviral CRISPR-guide RNA library
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2 October 2017
Genome-scale CRISPR-Cas9 knockout screening in human cells
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PubMed Central
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2 October 2017
Genetic screens in human cells using the CRISPR-Cas9 system
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4833918
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2 October 2017
Essential gene profiles in breast, pancreatic, and ovarian cancer cells.
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2 October 2017
Global gene disruption in human cells to assign genes to phenotypes by deep sequencing
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2 October 2017
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
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2 October 2017
Highly parallel identification of essential genes in cancer cells
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2 October 2017
Molecular biology. Use and abuse of RNAi to study mammalian gene function
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23 September 2018
A probability-based approach for the analysis of large-scale RNAi screens.
1 reference
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reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4833918
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Minimizing the risk of reporting false positives in large-scale RNAi screens
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS12859-016-1015-8
retrieved
21 January 2018
Identifiers
DOI
10.1186/S12859-016-1015-8
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
DBLP publication ID
journals/bmcbi/HartM16
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
Dimensions Publication ID
1013321403
0 references
PMC publication ID
4833918
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
PubMed publication ID
27083490
1 reference
stated in
Europe PubMed Central
PMC publication ID
4833918
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27083490%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 April 2020
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