(Q36003694)

11 August 2017

Mutation of conserved histidines alters tertiary structure and nanomechanics of consensus ankyrin repeats. (English)

1 reference

11 August 2017

4

Klaus Schulten

1 reference

11 August 2017

5

Piotr E Marszalek

1 reference

11 August 2017

2

Johan Strümpfer

1 reference

11 August 2017

Whasil Lee

1

1 reference

PMCID

3365944

11 August 2017

Vann Bennett

series ordinal

3

1 reference

PMCID

3365944

11 August 2017

language of work or name

English

0 references

publication date

18 April 2012

1 reference

11 August 2017

7

1 reference

Journal of Biological Chemistry

inferred from page(s)

published in

1 reference

11 August 2017

287

1 reference

11 August 2017

23

1 reference

11 August 2017

19115-19121

1 reference

All-atom empirical potential for molecular modeling and dynamics studies of proteins

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Full reconstruction of a vectorial protein folding pathway by atomic force microscopy and molecular dynamics simulations

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Fast and forceful refolding of stretched alpha-helical solenoid proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Designed biomaterials to mimic the mechanical properties of muscles.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Contributions of conserved TPLH tetrapeptides to the conformational stability of ankyrin repeat proteins.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Mechanical unfolding of an ankyrin repeat protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Force and function: probing proteins with AFM-based force spectroscopy.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

A theoretical model for the mechanical unfolding of repeat proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Ligand-dependent equilibrium fluctuations of single calmodulin molecules

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Folding and unfolding mechanism of highly stable full-consensus ankyrin repeat proteins.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Stabilizing ionic interactions in a full-consensus ankyrin repeat protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Organizing the fluid membrane bilayer: diseases linked to spectrin and ankyrin

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Revealing the bifurcation in the unfolding pathways of GFP by using single-molecule experiments and simulations

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Single-molecule experiments in vitro and in silico

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Forced unfolding of coiled-coils in fibrinogen by single-molecule AFM.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Spectrin domains lose cooperativity in forced unfolding

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Stepwise unfolding of ankyrin repeats in a single protein revealed by atomic force microscopy

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Scalable molecular dynamics with NAMD

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Exploring the energy landscape of GFP by single-molecule mechanical experiments

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Hereditary spherocytosis--defects in proteins that connect the membrane skeleton to the lipid bilayer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Structure and functional significance of mechanically unfolded fibronectin type III1 intermediates

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Designing repeat proteins: well-expressed, soluble and stable proteins from combinatorial libraries of consensus ankyrin repeat proteins.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Crystal structure of a 12 ANK repeat stack from human ankyrinR.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Versatile cloning system for construction of multimeric proteins for use in atomic force microscopy.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Simulated refolding of stretched titin immunoglobulin domains

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Spectrin and ankyrin-based pathways: metazoan inventions for integrating cells into tissues

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Visualizing and quantifying molecular goodness-of-fit: small-probe contact dots with explicit hydrogen atoms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

VMD: visual molecular dynamics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

Forced unfolding of proteins within cells

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3365944

The energy landscape of modular repeat proteins: topology determines folding mechanism in the ankyrin family

11 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.365569

Nanospring behaviour of ankyrin repeats.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.365569

Characterization and further stabilization of designed ankyrin repeat proteins by combining molecular dynamics simulations and experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.365569

The molecular elasticity of the extracellular matrix protein tenascin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.365569

Mechanical unfolding pathways of the enhanced yellow fluorescent protein revealed by single molecule force spectroscopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.365569

Reverse engineering of the giant muscle protein titin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.365569

Hidden complexity in the mechanical properties of titin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.365569

Polysaccharide elasticity governed by chair–boat transitions of the glucopyranose ring

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.365569

In search of the hair-cell gating spring elastic properties of ankyrin and cadherin repeats

21 January 2018

1 reference

12 December 2020

Hematologically important mutations: ankyrin variants in hereditary spherocytosis

1 reference

12 December 2020

Reversible unfolding of individual titin immunoglobulin domains by AFM

1 reference

12 December 2020

Measuring protein mechanics by atomic force microscopy

1 reference

12 December 2020

Cellular and membrane properties of alpha and beta thalassemic erythrocytes are different: implication for differences in clinical manifestations

1 reference

12 December 2020

Mechanical Unfolding of a Titin Ig Domain: Structure of Transition State Revealed by Combining Atomic Force Microscopy, Protein Engineering and Molecular Dynamics Simulations

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M112.365569

1 reference

11 August 2017

1 reference

11 August 2017

1 reference

PMCID

3365944