(Q36233844)

12 August 2017

Feedback, Mass Conservation and Reaction Kinetics Impact the Robustness of Cellular Oscillations (English)

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12 August 2017

1

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Antonio Z Politi

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2

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Ralf Steuer

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4

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Bente Kofahl

series ordinal

3

object named as

Bente Kofahl

1 reference

12 August 2017

Jana Wolf

5

1 reference

12 August 2017

27 December 2016

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PLOS Computational Biology

12 August 2017

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12 August 2017

12

1 reference

12 August 2017

12

1 reference

12 August 2017

e1005298

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Creative Commons Attribution 4.0 International

12 August 2017

start time

27 December 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Robustness and period sensitivity analysis of minimal models for biochemical oscillators

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Positive feedback promotes oscillations in negative feedback loops

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1 October 2017

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1 October 2017

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Encoding and decoding cellular information through signaling dynamics

1 October 2017

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Modeling the effect of cell division on genetic oscillators

1 October 2017

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Systems biology of cellular rhythms

1 October 2017

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Roles of protein ubiquitination and degradation kinetics in biological oscillations

1 October 2017

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Efficient characterization of high-dimensional parameter spaces for systems biology.

1 October 2017

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Frequency control of cell cycle oscillators

1 October 2017

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SnapShot: key numbers in biology

1 October 2017

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Periodic cyclin-Cdk activity entrains an autonomous Cdc14 release oscillator

1 October 2017

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Efficient estimation of the robustness region of biological models with oscillatory behavior

1 October 2017

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'Glocal' robustness analysis and model discrimination for circadian oscillators

1 October 2017

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Impulses and Physiological States in Theoretical Models of Nerve Membrane

1 October 2017

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Frequency-modulated nuclear localization bursts coordinate gene regulation

1 October 2017

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Network motifs: theory and experimental approaches

1 October 2017

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Sensitivity analysis of parameters controlling oscillatory signalling in the NF-kappaB pathway: the roles of IKK and IkappaBalpha

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Extension of a genetic network model by iterative experimentation and mathematical analysis

1 October 2017

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ON TEMPERATURE INDEPENDENCE IN THE CLOCK SYSTEM CONTROLLING EMERGENCE TIME IN DROSOPHILA

1 October 2017

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Circuit topology and the evolution of robustness in two-gene circadian oscillators

1 October 2017

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Models of the inositol trisphosphate receptor.

1 October 2017

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Robustness of cellular functions

1 October 2017

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Modeling feedback loops of the Mammalian circadian oscillator

1 October 2017

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Robustness properties of circadian clock architectures

1 October 2017

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Control of calcium oscillations by membrane fluxes

1 October 2017

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The Roles of APC and Axin Derived from Experimental and Theoretical Analysis of the Wnt Pathway

1 October 2017

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Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell

1 October 2017

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Quantifying robustness of biochemical network models

1 October 2017

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Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop

1 October 2017

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Mechanisms of noise-resistance in genetic oscillators

1 October 2017

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Robustness of circadian rhythms with respect to molecular noise

1 October 2017

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A synthetic oscillatory network of transcriptional regulators

1 October 2017

1 reference

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Calcium oscillations increase the efficiency and specificity of gene expression

1 October 2017

1 reference

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An amplified sensitivity arising from covalent modification in biological systems

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

General Homeostasis of the Frequency of Circadian Oscillations

1 October 2017

1 reference

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Minimal model for signal-induced Ca2+ oscillations and for their frequency encoding through protein phosphorylation

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Modeling the cell division cycle: cdc2 and cyclin interactions

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

A single-pool inositol 1,4,5-trisphosphate-receptor-based model for agonist-stimulated oscillations in Ca2+ concentration

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Regulation of oscillation dynamics in biochemical systems with dual negative feedback loops

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Robust, tunable biological oscillations from interlinked positive and negative feedback loops.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Towards a theory of biological robustness

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Circadian rhythms in the suprachiasmatic nucleus are temperature-compensated and phase-shifted by heat pulses in vitro

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Dynamics of two-component biochemical systems in interacting cells; synchronization and desynchronization of oscillations and multiple steady states

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Mathematics of cellular control processes I. Negative feedback to one gene

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Noise facilitates transcriptional control under dynamic inputs

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

A fast, robust and tunable synthetic gene oscillator.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Genetic oscillation deduced from Hopf bifurcation in a genetic regulatory network with delays

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Computational approaches to the topology, stability and dynamics of metabolic networks.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Quantitative performance metrics for robustness in circadian rhythms.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Analysing the robustness of cellular rhythms.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Intracellular delay limits cyclic changes in gene expression.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Model reduction and analysis of robustness for the Wnt/beta-catenin signal transduction pathway.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Saturation of enzyme kinetics in circadian clock models.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

A model for circadian oscillations in the Drosophila period protein (PER).

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Oscillatory behavior in enzymatic control processes

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226835

Negative feedback and ultrasensitivity can bring about oscillations in the mitogen-activated protein kinase cascades

22 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1005298

Sensitivity of CaM kinase II to the frequency of Ca2+ oscillations

21 January 2018

1 reference

12 December 2020

Self-Oscillations in Glycolysis. 1. A Simple Kinetic Model

1 reference

12 December 2020

pH homeostasis of the circadian sporulation rhythm in clock mutants of Neurospora crassa

1 reference

12 December 2020

Temperature and nitric oxide control spontaneous calcium transients in astrocytes

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.1005298

Identifiers

DOI

1 reference

journals/ploscb/BaumPKSW16

12 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

5226835

12 August 2017

PubMed publication ID

28027301

1 reference

PMC publication ID

5226835