(Q36368740)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

Regulation of the nucleosome unwrapping rate controls DNA accessibility (English)

1 reference

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12 February 2020

6

1 reference

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12 February 2020

Jennifer J Ottesen

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

author name string

Justin A North

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

John C Shimko

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Sarah Javaid

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Alex M Mooney

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Matthew A Shoffner

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Ralf Bundschuh

7

1 reference

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12 February 2020

Richard Fishel

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Michael G Poirier

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

language of work or name

English

0 references

publication date

10 September 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

number of pages

13

1 reference

inferred from page(s)

published in

Nucleic Acids Research

1 reference

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12 February 2020

volume

40

1 reference

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12 February 2020

issue

20

1 reference

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12 February 2020

page(s)

10215-10227

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

12 February 2020

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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30 September 2017

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Comprehensive structural analysis of mutant nucleosomes containing lysine to glutamine (KQ) substitutions in the H3 and H4 histone-fold domains

30 September 2017

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Histone fold modifications control nucleosome unwrapping and disassembly

30 September 2017

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A quantitative model of nucleosome dynamics.

30 September 2017

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Crystal structure of the human centromeric nucleosome containing CENP-A

30 September 2017

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Integrated approaches reveal determinants of genome-wide binding and function of the transcription factor Pho4.

30 September 2017

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Dynamics of nucleosome invasion by DNA binding proteins

30 September 2017

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Signals and combinatorial functions of histone modifications

30 September 2017

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Preparation of fully synthetic histone H3 reveals that acetyl-lysine 56 facilitates protein binding within nucleosomes

30 September 2017

1 reference

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Extensive role of the general regulatory factors, Abf1 and Rap1, in determining genome-wide chromatin structure in budding yeast

30 September 2017

1 reference

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Structure of RCC1 chromatin factor bound to the nucleosome core particle

30 September 2017

1 reference

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The histone chaperone Nap1 promotes nucleosome assembly by eliminating nonnucleosomal histone DNA interactions

30 September 2017

1 reference

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Chaperoning histones during DNA replication and repair

30 September 2017

1 reference

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Histone H3 Thr 45 phosphorylation is a replication-associated post-translational modification in S. cerevisiae

30 September 2017

1 reference

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A method for genetically installing site-specific acetylation in recombinant histones defines the effects of H3 K56 acetylation

30 September 2017

1 reference

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JAK2 phosphorylates histone H3Y41 and excludes HP1alpha from chromatin

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

The logic of chromatin architecture and remodelling at promoters

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Dynamics and function of compact nucleosome arrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

spFRET using alternating excitation and FCS reveals progressive DNA unwrapping in nucleosomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Acetylation of histone H3 at the nucleosome dyad alters DNA-histone binding.

30 September 2017

1 reference

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Phosphorylation of histone H3 Thr-45 is linked to apoptosis

30 September 2017

1 reference

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The biology of chromatin remodeling complexes

30 September 2017

1 reference

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CBP/p300-mediated acetylation of histone H3 on lysine 56

30 September 2017

1 reference

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Histone h3 lysine 56 acetylation is linked to the core transcriptional network in human embryonic stem cells.

30 September 2017

1 reference

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Histone H3 K56 hyperacetylation perturbs replisomes and causes DNA damage

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Histone chaperones in nucleosome eviction and histone exchange

30 September 2017

1 reference

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Spontaneous access to DNA target sites in folded chromatin fibers

30 September 2017

1 reference

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Sir2 deacetylates histone H3 lysine 56 to regulate telomeric heterochromatin structure in yeast.

30 September 2017

1 reference

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Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.

30 September 2017

1 reference

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Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication

30 September 2017

1 reference

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Proline isomerization of histone H3 regulates lysine methylation and gene expression

30 September 2017

1 reference

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Rapid accessibility of nucleosomal DNA in yeast on a second time scale

30 September 2017

1 reference

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An improved map of conserved regulatory sites for Saccharomyces cerevisiae

30 September 2017

1 reference

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Rapid spontaneous accessibility of nucleosomal DNA.

30 September 2017

1 reference

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Nucleosomes facilitate their own invasion

30 September 2017

1 reference

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Measurement of histone-DNA interaction free energy in nucleosomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

The structure of DNA in the nucleosome core

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Preparation of nucleosome core particle from recombinant histones

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Sin mutations of histone H3: influence on nucleosome core structure and function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Mapping nucleosome position at single base-pair resolution by using site-directed hydroxyl radicals

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Binding of disparate transcriptional activators to nucleosomal DNA is inherently cooperative

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Fluorescence resonance energy transfer and nucleic acids

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Structural analysis of a triple complex between the histone octamer, a Xenopus gene for 5S RNA and transcription factor IIIA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Nucleosome remodeling by hMSH2-hMSH6.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

A compiled and systematic reference map of nucleosome positions across the Saccharomyces cerevisiae genome

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Acetylated lysine 56 on histone H3 drives chromatin assembly after repair and signals for the completion of repair

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Nucleosomal locations of dominant DNA sequence motifs for histone-DNA interactions and nucleosome positioning

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Mismatch repair, molecular switches, and signal transduction

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Cleavage of LexA repressor.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3488218

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

21 September 2018

1 reference

12 December 2020

A single high affinity binding site for histone H1 in a nucleosome containing the Xenopus borealis 5 S ribosomal RNA gene

1 reference

12 December 2020

A model for the cooperative binding of eukaryotic regulatory proteins to nucleosomal target sites

1 reference

12 December 2020

Characterization of nucleosome core particles containing histone proteins made in bacteria

1 reference

12 December 2020

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

1 reference

12 December 2020

Sequence-dependent nucleosome structure and stability variations detected by Förster resonance energy transfer

1 reference

12 December 2020

Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites

1 reference

12 December 2020

Effects of histone acetylation on the equilibrium accessibility of nucleosomal DNA target sites

1 reference

12 December 2020

Histone-DNA contacts in a nucleosome core containing a Xenopus 5S rRNA gene

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKS747

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

PubMed publication ID

22965129

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22965129%20AND%20SRC:MED&resulttype=core&format=json