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OrthoFiller: utilising data from multiple species to improve the completeness of genome annotations
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
title
OrthoFiller: utilising data from multiple species to improve the completeness of genome annotations
(English)
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
main subject
genome annotation
1 reference
based on heuristic
inferred from title
corrigendum / erratum
Erratum to: OrthoFiller: utilising data from multiple species to improve the completeness of genome annotations
1 reference
stated in
Crossref
DOI
10.1186/S12864-017-3849-5
retrieved
12 July 2019
reference URL
http://api.crossref.org/works?select=update-to&filter=doi:10.1186/S12864-017-3849-5
author
Steven Kelly
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
author name string
Michael P Dunne
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
language of work or name
English
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publication date
18 May 2017
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
published in
BMC Genomics
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
volume
18
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
issue
1
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
page(s)
390
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
cites work
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
HISAT: a fast spliced aligner with low memory requirements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Extensive error in the number of genes inferred from draft genome assemblies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Automated alignment-based curation of gene models in filamentous fungi
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
A beginner's guide to eukaryotic genome annotation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Phytozome: a comparative platform for green plant genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
PomBase: a comprehensive online resource for fission yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
HMMER web server: interactive sequence similarity searching
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
High-quality draft assemblies of mammalian genomes from massively parallel sequence data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
The sequence read archive
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
BEDTools: a flexible suite of utilities for comparing genomic features
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Comparative genomics of protoploid Saccharomycetaceae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Promiscuous DNA in the nuclear genomes of hemiascomycetous yeasts
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Genome evolution in yeasts
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
The Ashbya gossypii Genome as a Tool for Mapping the Ancient Saccharomyces cerevisiae Genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
The genome sequence of Schizosaccharomyces pombe
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
30 September 2017
Are We There Yet? Reliably Estimating the Completeness of Plant Genome Sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
21 September 2018
Ebola threatens a way of life
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1186%2FS12864-017-3771-X
retrieved
21 January 2018
Technology: The $1,000 genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5437544
retrieved
5 December 2018
Identifiers
DOI
10.1186/S12864-017-3771-X
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
PMCID
5437544
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
PubMed ID
28521726
1 reference
stated in
Europe PubMed Central
PMCID
5437544
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28521726%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 March 2020
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