(Q36397840)

13 August 2017

Folding pathways of proteins with increasing degree of sequence identities but different structure and function (English)

1 reference

Carlo Travaglini Allocatelli

13 August 2017

0 references

0 references

Rajanish Giri

1

0 references

Stefano Gianni

object named as

Stefano Gianni

series ordinal

6

0 references

Maurizio Brunori

object named as

Maurizio Brunori

series ordinal

5

0 references

series ordinal

3

object named as

Carlo Travaglini-Allocatelli

1 reference

13 August 2017

2

Angela Morrone

1 reference

13 August 2017

Per Jemth

4

1 reference

PMC publication ID

3497760

13 August 2017

language of work or name

English

0 references

publication date

31 May 2012

1 reference

13 August 2017

5

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

13 August 2017

109

1 reference

13 August 2017

44

1 reference

13 August 2017

17772-17776

1 reference

GB1 is not a two-state folder: identification and characterization of an on-pathway intermediate

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

The denatured state dictates the topology of two proteins with almost identical sequence but different native structure and function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

A minimal sequence code for switching protein structure and function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Folding and stability of globular proteins and implications for function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Comparison of successive transition states for folding reveals alternative early folding pathways of two homologous proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

NMR structures of two designed proteins with high sequence identity but different fold and function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

From the first protein structures to our current knowledge of protein folding: delights and scepticisms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Characterisation of transition state structures for protein folding using 'high', 'medium' and 'low' {Phi}-values

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

The design and characterization of two proteins with 88% sequence identity but different structure and function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

A conserved folding mechanism for PDZ domains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Malleability of protein folding pathways: a simple reason for complex behaviour

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Sub-microsecond protein folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

The family feud: do proteins with similar structures fold via the same pathway?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Phi-value analysis and the nature of protein-folding transition states

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

A surprising simplicity to protein folding.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Experiment and theory highlight role of native state topology in SH3 folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Folding dynamics and mechanism of beta-hairpin formation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Transient aggregates in protein folding are easily mistaken for folding intermediates

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Funnels, pathways, and the energy landscape of protein folding: a synthesis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Optimization of rates of protein folding: the nucleation-condensation mechanism and its implications

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Exploring the cytochrome c folding mechanism: cytochrome c552 from thermus thermophilus folds through an on-pathway intermediate

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Structural analysis of the rate-limiting transition states in the folding of Im7 and Im9: similarities and differences in the folding of homologous proteins

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

An integrated kinetic analysis of intermediates and transition states in protein folding reactions.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

A common folding mechanism in the cytochrome c family

28 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1201794109

Lever-arm mechanics of processive myosins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1201794109

Specific nucleus as the transition state for protein folding: evidence from the lattice model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1201794109

Engineering subtilisin into a fluoride-triggered processing protease useful for one-step protein purification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1201794109

Development of the multiple sequence approximation within the AGADIR model of alpha-helix formation: comparison with Zimm-Bragg and Lifson-Roig formalisms.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497760

Structural characterization of a misfolded intermediate populated during the folding process of a PDZ domain

21 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1201794109

Engineered Symmetric Connectivity of Secondary Structure Elements Highlights Malleability of Protein Folding Pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1201794109

The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1201794109

Three-state model for lysozyme folding: triangular folding mechanism with an energetically trapped intermediate

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22652570

12 December 2020

inferred from PubMed ID database lookup

Folding studies of immunoglobulin-like β-sandwich proteins suggest that they share a common folding pathway

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22652570

12 December 2020

inferred from PubMed ID database lookup

Changes of protein folding pathways by circular permutation. Overlapping nuclei promote global cooperativity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22652570

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.1201794109

1 reference

13 August 2017

0 references

1 reference

PMC publication ID

3497760

13 August 2017

PubMed publication ID

22652570

1 reference

PMC publication ID

3497760