(Q36398028)

13 August 2017

Separating the effects of internal friction and transition state energy to explain the slow, frustrated folding of spectrin domains (English)

1 reference

13 August 2017

Joseph M Rogers

4

0 references

author name string

Beth G Wensley

1

1 reference

13 August 2017

Lee Gyan Kwa

2

1 reference

13 August 2017

Sarah L Shammas

3

1 reference

13 August 2017

Stuart Browning

5

1 reference

13 August 2017

Ziqi Yang

6

1 reference

13 August 2017

Jane Clarke

7

1 reference

13 August 2017

language of work or name

English

0 references

publication date

18 June 2012

1 reference

Proceedings of the National Academy of Sciences of the United States of America

13 August 2017

1 reference

13 August 2017

109

1 reference

13 August 2017

44

1 reference

13 August 2017

17795-17799

1 reference

13 August 2017

Folding without charges

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Experimental evidence for a frustrated energy landscape in a three-helix-bundle protein family

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Different members of a simple three-helix bundle protein family have very different folding rate constants and fold by different mechanisms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Measuring internal friction of an ultrafast-folding protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Conformational entropy of alanine versus glycine in protein denatured states

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

The folding transition state of the cold shock protein is strongly polarized

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Apparent two-state tendamistat folding is a sequential process along a defined route

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Limited internal friction in the rate-limiting step of a two-state protein folding reaction

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Synergy between simulation and experiment in describing the energy landscape of protein folding

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Solution structure of the spectrin repeat: a left-handed antiparallel triple-helical coiled-coil

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Diffusion control in an elementary protein folding reaction

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

The control of protein stability and association by weak interactions with water: how do solvents affect these processes?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Crystal structure of the repetitive segments of spectrin

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Funnels, pathways, and the energy landscape of protein folding: a synthesis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Determination and analysis of urea and guanidine hydrochloride denaturation curves

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Role of diffusion in the folding of the alpha subunit of tryptophan synthase from Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Phasing the conformational unit of spectrin

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

The role of solvent viscosity in the dynamics of protein conformational changes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Spectrin R16: broad energy barrier or sequential transition states?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

The spectrin repeat folds into a three-helix bundle in solution.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Kinetic coupling between protein folding and prolyl isomerization. I. Theoretical models

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Diffusional barrier in the unfolding of a small protein.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

The folding pathway of spectrin R17 from experiment and simulation: using experimentally validated MD simulations to characterize States hinted at by experiment

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

The folding of spectrin domains II: phi-value analysis of R16.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3497808

Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain α-Spectrin

21 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1201793109

A breakdown of symmetry in the folding transition state of protein L

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1201793109

Exploring the energy surface of protein folding by structure-reactivity relationships and engineered proteins: observation of Hammond behavior for the gross structure of the transition state and anti-Hammond behavior for structural elements for unfo

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22711800

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Upper limit of the time scale for diffusion and chain collapse in chymotrypsin inhibitor 2

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22711800

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Viscosity dependence of the folding kinetics of a dimeric and monomeric coiled coil

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22711800

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1201793109

1 reference

13 August 2017

0 references

1 reference

13 August 2017

PubMed publication ID

22711800

1 reference