(Q36436061)

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4-Demethylwyosine synthase from Pyrococcus abyssi is a radical-S-adenosyl-L-methionine enzyme with an additional [4Fe-4S](+2) cluster that interacts with the pyruvate co-substrate

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

4-Demethylwyosine synthase from Pyrococcus abyssi is a radical-S-adenosyl-L-methionine enzyme with an additional [4Fe-4S](+2) cluster that interacts with the pyruvate co-substrate (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Pyrococcus abyssi

object named as

Pyrococcus abyssi

1 reference

based on heuristic

inferred from title

Velavan Kathirvelu

2

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Gustav Berggren

3

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

7

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Europe PubMed Central

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10 March 2020

8

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Ricardo García-Serres

11

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

author name string

Phanélie Perche-Letuvée

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Martin Clemancey

4

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Jean-Marc Latour

5

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Vincent Maurel

6

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Etienne Mulliez

9

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Marc Fontecave

10

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Serge Gambarelli

12

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Mohamed Atta

13

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

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publication date

5 October 2012

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10 March 2020

number of pages

12

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inferred from page(s)

Journal of Biological Chemistry

1 reference

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10 March 2020

287

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10 March 2020

49

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

41174-41185

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Pyruvate is the source of the two carbons that are required for formation of the imidazoline ring of 4-demethylwyosine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Biosynthesis of isoprene units: Mössbauer spectroscopy of substrate and inhibitor binding to the [4Fe-4S] cluster of the LytB/IspH enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Biosynthesis of wyosine derivatives in tRNA: an ancient and highly diverse pathway in Archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

A consensus mechanism for Radical SAM-dependent dehydrogenation? BtrN contains two [4Fe-4S] clusters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

ENDOR spectroscopy shows that guanine N1 binds to [4Fe-4S] cluster II of the S-adenosylmethionine-dependent enzyme MoaA: mechanistic implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Expanding chemical biology of 2-oxoglutarate oxygenases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Structure of an archaeal TYW1, the enzyme catalyzing the second step of wye-base biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Crystal structure of the radical SAM enzyme catalyzing tricyclic modified base formation in tRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Human mitochondrial diseases associated with tRNA wobble modification deficiency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Discovery of a gene family critical to wyosine base formation in a subset of phenylalanine-specific transfer RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Specific correlation between the wobble modification deficiency in mutant tRNAs and the clinical features of a human mitochondrial disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

S-adenosylmethionine: nothing goes to waste

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

The importance of being modified: roles of modified nucleosides and Mg2+ in RNA structure and function.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Summary: the modified nucleosides of RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Mössbauer and EPR studies of activated aconitase: development of a localized valence state at a subsite of the [4Fe-4S] cluster on binding of citrate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

30 September 2017

Studies of inhibitor binding to the [4Fe-4S] cluster of quinolinate synthase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

21 September 2018

The radical SAM enzyme AlbA catalyzes thioether bond formation in subtilosin A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

21 September 2018

Isoprenoid biosynthesis via the MEP pathway: in vivo Mössbauer spectroscopy identifies a [4Fe-4S]2+ center with unusual coordination sphere in the LytB protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

21 September 2018

Coordination and Mechanism of Reversible Cleavage of S-Adenosylmethionine by the [4Fe-4S] Center in Lysine 2,3-Aminomutase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

21 September 2018

The [4Fe-4S](2+) cluster in reconstituted biotin synthase binds S-adenosyl-L-methionine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510817

21 September 2018

Structure of wye (Yt base) and wyosine (Yt) from Torulopsis utilis phenylalanine transfer ribonucleic acid

1 reference

https://pubmed.ncbi.nlm.nih.gov/23043105

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Semi-micro methods for analysis of labile sulfide and of labile sulfide plus sulfane sulfur in unusually stable iron-sulfur proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/23043105

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid colorimetric micromethod for the quantitation of complexed iron in biological samples

1 reference

https://pubmed.ncbi.nlm.nih.gov/23043105

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribonucleoside analysis by reversed-phase high-performance liquid chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/23043105

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation of the anaerobic ribonucleotide reductase by S-adenosylmethionine

1 reference

https://pubmed.ncbi.nlm.nih.gov/23043105

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M112.405019

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23043105%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

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