(Q36457132)

English

Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics

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scholarly article

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Europe PubMed Central

PMC publication ID

14 August 2017

Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics (English)

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Europe PubMed Central

PMC publication ID

14 August 2017

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human papilloma virus

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object named as

human papillomavirus

29 September 2024

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Mariano Dellarole

2

object named as

Mariano Dellarole

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

author name string

Ignacio E Sánchez

1

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Kevin Gaston

3

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Europe PubMed Central

PMC publication ID

14 August 2017

Gonzalo de Prat Gay

4

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Europe PubMed Central

PMC publication ID

14 August 2017

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publication date

15 December 2007

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Europe PubMed Central

PMC publication ID

14 August 2017

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14

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Nucleic Acids Research

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Europe PubMed Central

PMC publication ID

14 August 2017

36

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Europe PubMed Central

PMC publication ID

14 August 2017

3

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

756-769

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Case-control study of human papillomavirus and oropharyngeal cancer

1 reference

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Molecular dynamics of the DNA-binding domain of the papillomavirus E2 transcriptional regulator uncover differential properties for DNA target accommodation.

1 reference

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Enrichment or depletion of a GO category within a class of genes: which test?

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Characterization of the nuclear localization signal of high risk HPV16 E2 protein

1 reference

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Human papillomavirus E2 protein associates with nuclear receptors to stimulate nuclear receptor- and E2-dependent transcriptional activations in human cervical carcinoma cells

1 reference

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Epidemiological and functional implications of molecular variants of human papillomavirus.

1 reference

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Structural and thermodynamic basis for the enhanced transcriptional control by the human papillomavirus strain-16 E2 protein

1 reference

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E2 proteins from high- and low-risk human papillomavirus types differ in their ability to bind p53 and induce apoptotic cell death

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Molecular biology of human papillomavirus infection and cervical cancer

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Different papillomaviruses have different repertoires of transcription factor binding sites: convergence and divergence in the upstream regulatory region

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30 September 2017

Breaking symmetry in protein dimers: designs and functions

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enoLOGOS: a versatile web tool for energy normalized sequence logos

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30 September 2017

PUBLIC HEALTH: High Hopes and Dilemmas for a Cervical Cancer Vaccine

1 reference

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30 September 2017

Conserved methylation patterns of human papillomavirus type 16 DNA in asymptomatic infection and cervical neoplasia

1 reference

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30 September 2017

The human papillomavirus-18 genome is efficiently targeted by cellular DNA methylation

1 reference

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Classification of papillomaviruses

1 reference

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WebLogo: A Sequence Logo Generator

1 reference

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30 September 2017

Predicting indirect readout effects in protein-DNA interactions

1 reference

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1 reference

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30 September 2017

Molecular dynamics simulations of papilloma virus E2 DNA sequences: dynamical models for oligonucleotide structures in solution

1 reference

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30 September 2017

Comparison of the structure and DNA-binding properties of the E2 proteins from an oncogenic and a non-oncogenic human papillomavirus

1 reference

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30 September 2017

Methylation Patterns of Papillomavirus DNA, Its Influence on E2 Function, and Implications in Viral Infection

1 reference

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30 September 2017

Solution measurement of DNA curvature in papillomavirus E2 binding sites

1 reference

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30 September 2017

Multiple sequence alignment with the Clustal series of programs

1 reference

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30 September 2017

CpG methylation of human papillomavirus type 16 DNA in cervical cancer cell lines and in clinical specimens: genomic hypomethylation correlates with carcinogenic progression

1 reference

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30 September 2017

Asymmetric recognition of nonconsensus AP-1 sites by Fos-Jun and Jun-Jun influences transcriptional cooperativity with NFAT1

1 reference

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30 September 2017

Epidemiologic classification of human papillomavirus types associated with cervical cancer

1 reference

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30 September 2017

Transcriptional activity among high and low risk human papillomavirus E2 proteins correlates with E2 DNA binding

1 reference

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30 September 2017

Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain

1 reference

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30 September 2017

The papillomavirus E2 proteins: structure, function, and biology

1 reference

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DNA bending by an adenine-thymine tract and its role in gene regulation

1 reference

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30 September 2017

Glucocorticoid-induced DNA demethylation and gene memory during development

1 reference

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30 September 2017

Orientation of a novel DNA binding site affects human papillomavirus-mediated transcription and replication

1 reference

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30 September 2017

Asymmetric DNA binding by a homodimeric bHLH protein

1 reference

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30 September 2017

The structural basis of DNA target discrimination by papillomavirus E2 proteins

1 reference

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30 September 2017

A functional NF-kappaB binding site in the human papillomavirus type 16 long control region

1 reference

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30 September 2017

BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences

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30 September 2017

Structure of a HAP1-DNA complex reveals dramatically asymmetric DNA binding by a homodimeric protein

1 reference

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30 September 2017

Crystal structure of the E2 DNA-binding domain from human papillomavirus type 16: implications for its DNA binding-site selection mechanism

1 reference

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30 September 2017

Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets

1 reference

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30 September 2017

Human papillomavirus type 31b E1 and E2 transcript expression correlates with vegetative viral genome amplification

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30 September 2017

Escherichia coli cAMP receptor protein-DNA complexes. 2. Structural asymmetry of DNA bending

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30 September 2017

An embryonic demethylation mechanism involving binding of transcription factors to replicating DNA

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30 September 2017

Differential requirements for conserved E2 binding sites in the life cycle of oncogenic human papillomavirus type 31

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30 September 2017

Different mechanisms contribute to the E2-mediated transcriptional repression of human papillomavirus type 18 viral oncogenes

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30 September 2017

Cell-type-specific separate regulation of the E6 and E7 promoters of human papillomavirus type 6a by the viral transcription factor E2

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30 September 2017

CpG methylation directly inhibits binding of the human papillomavirus type 16 E2 protein to specific DNA sequences.

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30 September 2017

A fluorescence anisotropy study of DNA binding by HPV-11 E2C protein: a hierarchy of E2-binding sites

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30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

E2 represses the late gene promoter of human papillomavirus type 8 at high concentrations by interfering with cellular factors

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30 September 2017

Human papillomavirus type 11 E2 proteins repress the homologous E6 promoter by interfering with the binding of host transcription factors to adjacent elements.

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30 September 2017

Two E2 binding sites (E2BS) alone or one E2BS plus an A/T-rich region are minimal requirements for the replication of the human papillomavirus type 11 origin.

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30 September 2017

DNA recognition by beta-sheets in the Arc repressor-operator crystal structure

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30 September 2017

The human papillomavirus type 16 E2 transcription factor binds with low cooperativity to two flanking sites and represses the E6 promoter through displacement of Sp1 and TFIID.

1 reference

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30 September 2017

Two E2 binding sites alone are sufficient to function as the minimal origin of replication of human papillomavirus type 18 DNA.

1 reference

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30 September 2017

Kinetic and equilibrium binding studies of the human papillomavirus type-16 transcription regulatory protein E2 interacting with core enhancer elements

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30 September 2017

Selection of DNA binding sites by regulatory proteins

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30 September 2017

The upstream regulatory region of the human papilloma virus-16 contains an E2 protein-independent enhancer which is specific for cervical carcinoma cells and regulated by glucocorticoid hormones

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30 September 2017

Lambda repressor recognizes the approximately 2-fold symmetric half-operator sequences asymmetrically

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30 September 2017

E2 polypeptides encoded by bovine papillomavirus type 1 form dimers through the common carboxyl-terminal domain: transactivation is mediated by the conserved amino-terminal domain

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30 September 2017

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30 September 2017

Epidermodysplasia verruciformis associated human papillomaviruses present a subgenus-specific organization of the regulatory genome region

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30 September 2017

The E2 binding sites determine the efficiency of replication for the origin of human papillomavirus type 18

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30 September 2017

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30 September 2017

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30 September 2017

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28 June 2018

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28 June 2018

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28 June 2018

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28 June 2018

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28 June 2018

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28 June 2018

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28 June 2018

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28 June 2018

Early promoters of genital and cutaneous human papillomaviruses are differentially regulated by the bovine papillomavirus type 1 E2 gene product

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28 June 2018

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21 September 2018

CpG methylation of HPV 16 LCR at E2 binding site proximal to P97 is associated with cervical cancer in presence of intact E2.

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21 September 2018

Indirect readout of DNA sequence by papillomavirus E2 proteins depends upon net cation uptake.

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21 September 2018

Structural and energetic origins of sequence-specific DNA bending: Monte Carlo simulations of papillomavirus E2-DNA binding sites.

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21 September 2018

Free energy contributions to direct readout of a DNA sequence

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21 September 2018

Methylation of human papillomavirus genomes in cells of anal epithelia of HIV-infected men.

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21 September 2018

Solution structure of the HPV-16 E2 DNA binding domain, a transcriptional regulator with a dimeric beta-barrel fold

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21 October 2018

Distinctive Cognate Sequence Discrimination, Bound DNA Conformation, and Binding Modes in the E2 C-Terminal Domains from Prototype Human and Bovine Papillomaviruses†

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21 January 2018

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12 December 2020

based on heuristic

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12 December 2020

based on heuristic

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12 December 2020

based on heuristic

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DNA binding and bending by the human papillomavirus type 16 E2 protein. Recognition of an extended binding site

1 reference

https://pubmed.ncbi.nlm.nih.gov/18084026

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the DNA-binding activity of the E1 and E2 proteins and the E1/E2 complex of human papillomavirus type 33

1 reference

https://pubmed.ncbi.nlm.nih.gov/18084026

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKM1104

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

ResearchGate publication ID

0 references

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