(Q36458601)

English

Peptide deformylase is a potential target for anti-Helicobacter pylori drugs: reverse docking, enzymatic assay, and X-ray crystallography validation

scientific article

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scholarly article

1 reference

Europe PubMed Central

14 August 2017

Peptide deformylase is a potential target for anti-Helicobacter pylori drugs: reverse docking, enzymatic assay, and X-ray crystallography validation (English)

1 reference

Europe PubMed Central

14 August 2017

X-ray crystallography

0 references

Helicobacter pylori

0 references

11

object named as

Xu Shen

1 reference

Europe PubMed Central

14 August 2017

author name string

Jianhua Cai

1

1 reference

Europe PubMed Central

14 August 2017

Cong Han

2

1 reference

Europe PubMed Central

14 August 2017

Tiancen Hu

3

1 reference

Europe PubMed Central

14 August 2017

Jian Zhang

4

1 reference

Europe PubMed Central

14 August 2017

Dalei Wu

5

1 reference

Europe PubMed Central

14 August 2017

Fangdao Wang

6

1 reference

Europe PubMed Central

14 August 2017

Yunqing Liu

7

1 reference

Europe PubMed Central

14 August 2017

Jianping Ding

8

1 reference

Europe PubMed Central

14 August 2017

Kaixian Chen

9

1 reference

Europe PubMed Central

14 August 2017

Jianmin Yue

10

1 reference

Europe PubMed Central

14 August 2017

Hualiang Jiang

12

1 reference

Europe PubMed Central

14 August 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

1 August 2006

1 reference

Europe PubMed Central

14 August 2017

Protein Science

1 reference

Europe PubMed Central

14 August 2017

15

1 reference

Europe PubMed Central

14 August 2017

2071-2081

1 reference

Europe PubMed Central

14 August 2017

9

1 reference

Europe PubMed Central

14 August 2017

TarFisDock: a web server for identifying drug targets with docking approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Rapid computational identification of the targets of protein kinase inhibitors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Proteomics reveals that proteins expressed during the early stage of Bacillus anthracis infection are potential targets for the development of vaccines and drugs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Exploring biology with small organic molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Tools for target identification and validation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Unique structural characteristics of peptide deformylase from pathogenic bacterium Leptospira interrogans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

A new human peptide deformylase inhibitable by actinonin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

An unusual peptide deformylase features in the human mitochondrial N-terminal methionine excision pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Characterization of a human peptide deformylase: implications for antibacterial drug design

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Recent use of proton pump inhibitor-based triple therapies for the eradication of H pylori: a broad data review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Cocrystal structures of diaminopimelate decarboxylase: mechanism, evolution, and inhibition of an antibiotic resistance accessory factor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

The crystal structures of four peptide deformylases bound to the antibiotic actinonin reveal two distinct types: a platform for the structure-based design of antibacterial agents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Protein interaction domain mapping for the selection of validated targets and lead compounds in the anti-infectious area

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Crystals of peptide deformylase from Plasmodium falciparum reveal critical characteristics of the active site for drug design

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Resistance of Streptococcus pneumoniae to deformylase inhibitors is due to mutations in defB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

The finer things in X-ray diffraction data collection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Structural basis for the design of antibiotics targeting peptide deformylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Helicobacter pylori infection, a paradigm for chronic mucosal inflammation: pathogenesis and implications for eradication and prevention

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Genetic characterization of polypeptide deformylase, a distinctive enzyme of eubacterial translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Characterization of the Thermus thermophilus locus encoding peptide deformylase and methionyl-tRNA(fMet) formyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Cytotoxin production by Helicobacter pylori from patients with upper gastrointestinal tract diseases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Structure-based strategies for drug design and discovery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

30 September 2017

Control of peptide deformylase activity by metal cations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

28 June 2018

Purification, characterization, and inhibition of peptide deformylase from Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

28 June 2018

Towards a new therapeutic target: Helicobacter pylori flavodoxin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

21 September 2018

Crystal structure of peptide deformylase from Staphylococcus aureus in complex with actinonin, a naturally occurring antibacterial agent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

21 September 2018

Molecular cloning and characterization of a new peptide deformylase from human pathogenic bacterium Helicobacter pylori.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

21 September 2018

Helicobacter pylori: antibiotic resistance and eradication rates in Suffolk, UK, 1991-2001.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

21 September 2018

Novel structures derived from 2-[[(2-pyridyl)methyl]thio]-1H-benzimidazole as anti-Helicobacter pylori agents, Part 2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242601

21 September 2018

An all atom force field for simulations of proteins and nucleic acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/16882991

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A continual spectrophotometric assay for amino acid decarboxylases

1 reference

https://pubmed.ncbi.nlm.nih.gov/16882991

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Formate dehydrogenase-coupled spectrophotometric assay of peptide deformylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/16882991

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oxygen-mediated inactivation of peptide deformylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/16882991

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1110/PS.062238406

1 reference

Europe PubMed Central

14 August 2017

release_jurvsjgg7fcwfpwb2h3w2l7rkm

1 reference

https://api.fatcat.wiki/v0/release/jurvsjgg7fcwfpwb2h3w2l7rkm

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

14 August 2017

1 reference

Europe PubMed Central

14 August 2017

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