(Q36501384)

14 August 2017

Recognizing uncertainty increases robustness and reproducibility of mass spectrometry-based protein inferences (English)

1 reference

14 August 2017

1 reference

Lukas Käll

4

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author name string

Oliver Serang

series ordinal

1

1 reference

14 August 2017

Luminita Moruz

series ordinal

2

1 reference

14 August 2017

Michael R Hoopmann

series ordinal

3

1 reference

14 August 2017

language of work or name

1 reference

19 November 2012

1 reference

Journal of Proteome Research

14 August 2017

1 reference

14 August 2017

11

1 reference

14 August 2017

12

1 reference

14 August 2017

5586-5591

1 reference

A review of statistical methods for protein identification using tandem mass spectrometry

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Two-dimensional target decoy strategy for shotgun proteomics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Efficient marginalization to compute protein posterior probabilities from shotgun mass spectrometry data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Comparison of database search strategies for high precursor mass accuracy MS/MS data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Protein identification false discovery rates for very large proteomics data sets generated by tandem mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Proteomic parsimony through bipartite graph analysis improves accuracy and transparency

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

High-speed data reduction, feature detection, and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

A statistical model for identifying proteins by tandem mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Rapid and accurate peptide identification from tandem mass spectra

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Semi-supervised learning for peptide identification from shotgun proteomics datasets.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Reporting protein identification data: the next generation of guidelines.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

The need for guidelines in publication of peptide and protein identification data: Working Group on Publication Guidelines for Peptide and Protein Identification Data

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

Quality assessments of peptide-spectrum matches in shotgun proteomics

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534833

4 December 2018

Identifiers

DOI

10.1021/PR300426S

1 reference

14 August 2017

1 reference

14 August 2017

PubMed publication ID

23148905

1 reference