(Q36605552)

15 August 2017

Complete genome sequence of the plant-associated Serratia plymuthica strain AS13. (English)

1 reference

15 August 2017

0 references

Serratia plymuthica

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

3

1 reference

15 August 2017

7

1 reference

15 August 2017

20

1 reference

15 August 2017

9

Alla Lapidus

0 references

Hans-Peter Klenk

23

Hans-Peter Klenk

0 references

Roxanne Tapia

18

Roxanne Tapia

0 references

Tanja Woyke

22

Tanja Woyke

0 references

Cliff Han

Cliff Han

16

0 references

Roger Finlay

Roger D Finlay

2

0 references

Sam Pitluck

12

Sam Pitluck

1 reference

15 August 2017

10

Jan-Fang Cheng

1 reference

15 August 2017

4

Lynne Goodwin

1 reference

15 August 2017

19

Loren Hauser

1 reference

15 August 2017

6

Susan Lucas

1 reference

15 August 2017

17

John C Detter

1 reference

15 August 2017

11

David Bruce

1 reference

15 August 2017

21

Ioanna Pagani

1 reference

15 August 2017

15

Brittany Held

1 reference

15 August 2017

14

Galina Ovchinnikova

1 reference

15 August 2017

13

Lin Peters

1 reference

15 August 2017

1

Saraswoti Neupane

1 reference

15 August 2017

24

Nils Högberg

1 reference

15 August 2017

5

Sadhna Alström

1 reference

15 August 2017

James Han

8

1 reference

15 August 2017

language of work or name

1 reference

26 September 2012

1 reference

Standards in genomic sciences

15 August 2017

1 reference

15 August 2017

7

1 reference

15 August 2017

1

1 reference

15 August 2017

22-30

1 reference

Complete genome sequence of Serratia plymuthica strain AS12.

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Prodigal: prokaryotic gene recognition and translation initiation site identification

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

IMG ER: a system for microbial genome annotation expert review and curation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Genome survey and characterization of endophytic bacteria exhibiting a beneficial effect on growth and development of poplar trees

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

The minimum information about a genome sequence (MIGS) specification

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Clustal W and Clustal X version 2.0

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Improved prediction of signal peptides: SignalP 3.0

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Rfam: an RNA family database

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Gene ontology: tool for the unification of biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Consed: a graphical tool for sequence finishing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Base-calling of automated sequencer traces using phred. II. Error probabilities

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

30 September 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

30 September 2017

https://api.crossref.org/works/10.4056%2FSIGS.2966299

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570797

Validation List no. 106: Validation of publication of new names and new combinations previously effectively published outside the IJSEM

28 June 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2966299

Approved Lists of Bacterial Names

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2966299

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2966299

Strains of the genus Serratia as beneficial rhizobacteria of oilseed rape with antifungal properties

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2966299

Impact of formulation procedures on the effect of the biocontrol agent Serratia plymuthica HRO-C48 on Verticillium wilt in oilseed rape

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2966299

Biological Control of Fungal Strawberry Diseases bySerratia plymuthicaHRO-C48

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2966299

21 January 2018

Identifiers

DOI

10.4056/SIGS.2966299

1 reference

Dimensions Publication ID

15 August 2017

0 references

1 reference

15 August 2017

PubMed publication ID

23450001

1 reference