(Q36645983)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23268687%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

title

In-source fragmentation and the sources of partially tryptic peptides in shotgun proteomics (English)

1 reference

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21 February 2020

1 reference

4

1 reference

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21 February 2020

Wei-Jun Qian

5

1 reference

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21 February 2020

author name string

Jong-Seo Kim

1

1 reference

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21 February 2020

Matthew E Monroe

2

1 reference

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21 February 2020

David G Camp

3

1 reference

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21 February 2020

publication date

16 January 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23268687%20AND%20SRC:MED&resulttype=core&format=json

Journal of Proteome Research

21 February 2020

published in

1 reference

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21 February 2020

volume

12

1 reference

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21 February 2020

issue

2

1 reference

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21 February 2020

page(s)

910-916

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23268687%20AND%20SRC:MED&resulttype=core&format=json

Collisional activation and collision-activated dissociation of large multiply charged polypeptides and proteins produced by electrospray ionization.

21 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Analyzing protease specificity and detecting in vivo proteolytic events using tandem mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Does trypsin cut before proline?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

A data-mining scheme for identifying peptide structural motifs responsible for different MS/MS fragmentation intensity patterns

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Fully automated four-column capillary LC-MS system for maximizing throughput in proteomic analyses.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Use of an integrated MS--multiplexed MS/MS data acquisition strategy for high-coverage peptide mapping studies

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Statistical characterization of the charge state and residue dependence of low-energy CID peptide dissociation patterns

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: I. How much of the data is theoretically interpretable by s

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Shotgun collision-induced dissociation of peptides using a time of flight mass analyzer

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Primary sequence information from intact proteins by electrospray ionization tandem mass spectrometry

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Enzymatic digestion of proteins in solution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Stabilization of bovine trypsin by reductive methylation

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Taking advantage of nonspecific trypsin cleavages for the identification of seed storage proteins in cereals.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Efficient and specific trypsin digestion of microgram to nanogram quantities of proteins in organic-aqueous solvent systems

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Sonic spray as a dual polarity ion source for ion/ion reactions

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Trypsin cleaves exclusively C-terminal to arginine and lysine residues

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Use of artificial neural networks for the accurate prediction of peptide liquid chromatography elution times in proteome analyses

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Systematic and quantitative comparison of digest efficiency and specificity reveals the impact of trypsin quality on MS-based proteomics

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3584699

Tandem parallel fragmentation of peptides for mass spectrometry

4 December 2018

1 reference

12 December 2020

Use of a single-quadrupole mass spectrometer for collision-induced dissociation studies of multiply charged peptide ions produced by electrospray ionization

1 reference

12 December 2020

The implications of proteolytic background for shotgun proteomics

1 reference

12 December 2020

Pseudotrypsin. A modified bovine trypsin produced by limited autodigestion

1 reference

12 December 2020

INHIBITION OF CHYMOTRYPSIN ACTIVITY IN CRYSTALLINE TRYPSIN PREPARATIONS

1 reference

12 December 2020

Proteolytic activity of pseudotrypsin

1 reference

12 December 2020

Identifiers

DOI

10.1021/PR300955F

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23268687%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23268687%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

PubMed publication ID

23268687

1 reference