(Q36664822)

15 August 2017

Equilibrium distributions of topological states in circular DNA: interplay of supercoiling and knotting (English)

1 reference

15 August 2017

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Nicholas R. Cozzarelli

series ordinal

2

object named as

N R Cozzarelli

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15 August 2017

A A Podtelezhnikov

1

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15 August 2017

A V Vologodskii

series ordinal

3

1 reference

15 August 2017

language of work or name

English

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publication date

1 November 1999

1 reference

Proceedings of the National Academy of Sciences of the United States of America

15 August 2017

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15 August 2017

96

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15 August 2017

23

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15 August 2017

12974-12979

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maintained by WikiProject

15 August 2017

WikiProject Mathematics

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cites work

The effect of ionic conditions on DNA helical repeat, effective diameter and free energy of supercoiling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Probability of DNA knotting and the effective diameter of the DNA double helix

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Knotting of a DNA chain during ring closure

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

The helical repeat of DNA at high temperature

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Conformational and thermodynamic properties of supercoiled DNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Unwinding of double-stranded DNA helix by dehydration

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

The writhing number of a space curve

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Torsional and bending rigidity of the double helix from data on small DNA rings

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Biochemical topology: applications to DNA recombination and replication

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Supercoiled DNA-directed knotting by T4 topoisomerase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Action of nicking-closing enzyme on supercoiled and nonsupercoiled closed circular DNA: formation of a Boltzmann distribution of topological isomers

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Structure and reactions of closed duplex DNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

DNA gyrase: an enzyme that introduces superhelical turns into DNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Conformational fluctuations of DNA helix

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Simplification of DNA topology below equilibrium values by type II topoisomerases

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Extension of torsionally stressed DNA by external force

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Monte Carlo computation of the supercoiling energy, the sedimentation constant, and the radius of gyration of unknotted and knotted circular DNA.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Energetics of DNA twisting. I. Relation between twist and cyclization probability.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Electron microscopic studies on the folded chromosome of Escherichia coli.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Topological distributions and the torsional rigidity of DNA. A Monte Carlo study of DNA circles.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Variance of writhe for wormlike DNA rings with excluded volume.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Statistical mechanics and topology of polymer chains

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Statistical mechanics of supercoils and the torsional stiffness of the DNA double helix

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23884

Energetics of DNA twisting. II. Topoisomer analysis.

28 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Equation of State Calculations by Fast Computing Machines

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Monte Carlo analysis of the conformation of DNA catenanes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

The first 1,701,936 knots

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Hecke Algebra Representations of Braid Groups and Link Polynomials

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Electron microscopy of membrane-associated folded chromosomes of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Torsional rigidity of DNA and length dependence of the free energy of DNA supercoiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Moments for DNA topoisomers: the helical wormlike chain

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Conformational and thermodynamic properties of supercoiled DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Self-Linking and the Gauss Integral in Higher Dimensions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Interactions of highly charged colloidal cylinders with applications to double-stranded

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Computer simulation of DNA supercoiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

The statistics of superhelicity

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Rotational dynamics of DNA from 10(-10) to 10(-5) seconds: comparison of theory with optical experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.23.12974

Type II DNA topoisomerases: enzymes that can unknot a topologically knotted DNA molecule via a reversible double-strand break

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10557257

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.96.23.12974

1 reference

15 August 2017

0 references

1 reference

15 August 2017

PubMed publication ID

10557257

1 reference