(Q36740723)

16 August 2017

On the role of a conserved, potentially helix-breaking residue in the tRNA-binding alpha-helix of archaeal CCA-adding enzymes (English)

1 reference

16 August 2017

David Baker

3

0 references

author name string

Hyundae D Cho

series ordinal

1

1 reference

PMC publication ID

2441987

16 August 2017

Vanita D Sood

series ordinal

2

1 reference

PMC publication ID

2441987

16 August 2017

Alan M Weiner

series ordinal

4

1 reference

PMC publication ID

2441987

16 August 2017

language of work or name

English

0 references

publication date

21 May 2008

1 reference

16 August 2017

1 reference

16 August 2017

14

1 reference

16 August 2017

7

1 reference

16 August 2017

1284-1289

1 reference

Determinants of substrate specificity in RNA-dependent nucleotidyl transferases

16 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

A Note on the Kinetics of Enzyme Action

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Computational redesign of endonuclease DNA binding and cleavage specificity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Mechanism of transfer RNA maturation by CCA-adding enzyme without using an oligonucleotide template

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Design of a Novel Globular Protein Fold with Atomic-Level Accuracy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Use of nucleotide analogs by class I and class II CCA-adding enzymes (tRNA nucleotidyltransferase): deciphering the basis for nucleotide selection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Effective energy function for proteins in solution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

The CCA-adding enzyme has a single active site

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

A top-half tDNA minihelix is a good substrate for the eubacterial CCA-adding enzyme.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Prediction of protein side-chain rotamers from a backbone-dependent rotamer library: a new homology modeling tool

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

A minimal gene set for cellular life derived by comparison of complete bacterial genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Interaction of the 3′-end of tRNA with ribonuclease P RNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyltransferase superfamily: characterization of the CCA-adding enzyme from the archaeal hyperthermophile Sulfolobus shibatae.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Complete crystallographic analysis of the dynamics of CCA sequence addition.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

A model for C74 addition by CCA-adding enzymes: C74 addition, like C75 and A76 addition, does not involve tRNA translocation

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

An orientation-dependent hydrogen bonding potential improves prediction of specificity and structure for proteins and protein-protein complexes

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Collaboration between CC- and A-adding enzymes to build and repair the 3'-terminal CCA of tRNA in Aquifex aeolicus.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

U2 small nuclear RNA is a substrate for the CCA-adding enzyme (tRNA nucleotidyltransferase).

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441987

Archaeal CCA-adding enzymes: central role of a highly conserved beta-turn motif in RNA polymerization without translocation

5 September 2018

1 reference

12 December 2020

1 reference

12 December 2020

C--H...O hydrogen bond involving proline residues in alpha-helices

1 reference

12 December 2020

Kinetic and thermodynamic characterization of the R17 coat protein-ribonucleic acid interaction

1 reference

12 December 2020

https://api.fatcat.wiki/v0/release/b2y2dzvozfb3ng5csobglyn7bm

Identifiers

1 reference

30 July 2022

release_b2y2dzvozfb3ng5csobglyn7bm

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/b2y2dzvozfb3ng5csobglyn7bm

30 July 2022

https://api.fatcat.wiki/v0/release/b2y2dzvozfb3ng5csobglyn7bm

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/b2y2dzvozfb3ng5csobglyn7bm

PubMed publication ID

1 reference

30 July 2022