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English
Quantitative residue-level structure-evolution relationships in the yeast membrane proteome
scientific article published on January 2013
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scholarly article
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Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
title
Quantitative residue-level structure-evolution relationships in the yeast membrane proteome
(English)
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Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
author
Yu Xia
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3
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Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
Eric Franzosa
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Eric A Franzosa
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Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
author name string
Ran Xue
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2
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Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
publication date
1 January 2013
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3641637
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retrieved
26 February 2020
published in
Genome Biology and Evolution
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Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
volume
5
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Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
issue
4
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Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
page(s)
734-744
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PMC publication ID
3641637
reference URL
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retrieved
26 February 2020
cites work
Independent effects of protein core size and expression on residue-level structure-evolution relationships
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Three-dimensional structures of membrane proteins from genomic sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
The relationship between relative solvent accessibility and evolutionary rate in protein evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Lipid-binding surfaces of membrane proteins: evidence from evolutionary and structural analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
A structural dissection of amino acid substitutions in helical transmembrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
MPRAP: an accessibility predictor for a-helical transmembrane proteins that performs well inside and outside the membrane
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Structural imperatives impose diverse evolutionary constraints on helical membrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Structural determinants of the rate of protein evolution in yeast.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Solving the membrane protein folding problem
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Large-scale identification of yeast integral membrane protein interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Computational analysis of membrane proteins: genomic occurrence, structure prediction and helix interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Computational analysis of alpha-helical membrane protein structure: implications for the prediction of 3D structural models.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
MPtopo: A database of membrane protein topology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Helical membrane protein folding, stability, and evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Internal packing of helical membrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Solvent accessibility and purifying selection within proteins of Escherichia coli and Salmonella enterica.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
The Protein Data Bank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Membrane protein folding and stability: physical principles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Assessing the impact of secondary structure and solvent accessibility on protein evolution.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
SGD: Saccharomyces Genome Database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
PAML: a program package for phylogenetic analysis by maximum likelihood
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Reduced surface: an efficient way to compute molecular surfaces
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
A mutation data matrix for transmembrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
A simple method for displaying the hydropathic character of a protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
The interpretation of protein structures: Total volume, group volume distributions and packing density
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Amino acid composition and the evolutionary rates of protein-coding genes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Dominant forces in protein folding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
29 September 2017
Membrane environment imposes unique selection pressures on transmembrane domains of G protein-coupled receptors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
27 June 2018
Natural history and evolutionary principles of gene duplication in fungi
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
27 June 2018
Hydrophobic organization of membrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
27 June 2018
Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
27 June 2018
Why are polar residues within the membrane core evolutionary conserved?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
5 September 2018
Solvent exposure imparts similar selective pressures across a range of yeast proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
5 September 2018
Integrated prediction of the helical membrane protein interactome in yeast.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
5 September 2018
Helix-helix packing and interfacial pairwise interactions of residues in membrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
5 September 2018
Are membrane proteins "inside-out" proteins?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
5 September 2018
Coils in the Membrane Core Are Conserved and Functionally Important
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3641637
retrieved
4 December 2018
Selective constraints, amino acid composition, and the rate of protein evolution
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23512408
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Structural determinants of protein evolution are context-sensitive at the residue level
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23512408
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Systematically assessing the influence of 3-dimensional structural context on the molecular evolution of mammalian proteomes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23512408
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/GBE/EVT039
1 reference
stated in
Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
PMC publication ID
3641637
1 reference
stated in
Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
PubMed publication ID
23512408
1 reference
stated in
Europe PubMed Central
PMC publication ID
3641637
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23512408%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 February 2020
ResearchGate publication ID
236064576
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