(Q36856964)

16 August 2017

1 reference

title

HIV-1 reverse transcription: close encounters between the viral genome and a cellular tRNA. (English)

1 reference

16 August 2017

2

Ben Berkhout

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Truus E M Abbink

series ordinal

1

object named as

Truus E M Abbink

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16 August 2017

publication date

1 January 2007

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16 August 2017

published in

Advances in Pharmacology

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16 August 2017

volume

55

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16 August 2017

page(s)

99-135

1 reference

A novel long distance base-pairing interaction in human immunodeficiency virus type 1 RNA occludes the Gag start codon

16 August 2017

cites work

1 reference

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7 January 2021

Forced selection of a human immunodeficiency virus type 1 variant that uses a non-self tRNA primer for reverse transcription: involvement of viral RNA sequences and the reverse transcriptase enzyme

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7 January 2021

DNA found in human immunodeficiency virus type 1 particles may not be required for infectivity

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7 January 2021

Restoration of tRNA3Lys-primed(-)-strand DNA synthesis to an HIV-1 reverse transcriptase mutant with extended tRNAs. Implications for retroviral replication

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7 January 2021

Initiation of (-) strand DNA synthesis from tRNA(3Lys) on lentiviral RNAs: implications of specific HIV-1 RNA-tRNA(3Lys) interactions inhibiting primer utilization by retroviral reverse transcriptases.

1 reference

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7 January 2021

Role of post-transcriptional modifications of primer tRNALys,3 in the fidelity and efficacy of plus strand DNA transfer during HIV-1 reverse transcription

1 reference

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7 January 2021

Interaction of HIV-1 reverse transcriptase with a synthetic form of its replication primer, tRNALys,3

1 reference

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7 January 2021

Analysis of the interactions of HIV1 replication primer tRNA(Lys,3) with nucleocapsid protein and reverse transcriptase

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7 January 2021

Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains

1 reference

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7 January 2021

The tRNA primer activation signal in the human immunodeficiency virus type 1 genome is important for initiation and processive elongation of reverse transcription

1 reference

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7 January 2021

Switching the in vitro tRNA usage of HIV-1 by simultaneous adaptation of the PBS and PAS.

1 reference

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7 January 2021

Stabilization of the U5-leader stem in the HIV-1 RNA genome affects initiation and elongation of reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

A structured RNA motif is involved in correct placement of the tRNA(3)(Lys) primer onto the human immunodeficiency virus genome

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Initiation of HIV-1 reverse transcription is regulated by a primer activation signal

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Molecular analysis of the second template switch during reverse transcription of the HIV RNA template

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

The primer binding site on the RNA genome of human and simian immunodeficiency viruses is flanked by an upstream hairpin structure

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Forced evolution of a regulatory RNA helix in the HIV-1 genome

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

HIV-1 RNA editing, hypermutation, and error-prone reverse transcription

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7 January 2021

Retrovirus-mediated insertion of expressed and non-expressed genes at identical chromosomal locations

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7 January 2021

Roles of Pr55(gag) and NCp7 in tRNA(3)(Lys) genomic placement and the initiation step of reverse transcription in human immunodeficiency virus type 1.

1 reference

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7 January 2021

Incorporation of lysyl-tRNA synthetase into human immunodeficiency virus type 1

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Retrovirus-specific packaging of aminoacyl-tRNA synthetases with cognate primer tRNAs

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Ability of wild-type and mutant lysyl-tRNA synthetase to facilitate tRNA(Lys) incorporation into human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

The connection domain in reverse transcriptase facilitates the in vivo annealing of tRNALys3 to HIV-1 genomic RNA

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

HIV-1 Reverse Transcription A Termination Step at the Center of the Genome

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

A retroviral RNA secondary structure required for efficient initiation of reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Overlapping retrovirus U5 sequence elements are required for efficient integration and initiation of reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Isolation of a recombinant murine leukemia virus utilizing a new primer tRNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

The crystal structures of T. thermophilus lysyl-tRNA synthetase complexed with E. coli tRNA(Lys) and a T. thermophilus tRNA(Lys) transcript: anticodon recognition and conformational changes upon binding of a lysyl-adenylate analogue

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

RNA interactions in the 5' region of the HIV-1 genome

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Human immunodeficiency virus uses tRNA(Lys,3) as primer for reverse transcription in HeLa-CD4+ cells

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Reduced replication of human immunodeficiency virus type 1 mutants that use reverse transcription primers other than the natural tRNA(3Lys)

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Sequence variation of the human immunodeficiency virus primer-binding site suggests the use of an alternative tRNA(Lys) molecule in reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Improved envelope function selected by long-term cultivation of a translation-impaired HIV-1 mutant

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Alternative tRNA priming of human immunodeficiency virus type 1 reverse transcription explains sequence variation in the primer-binding site that has been attributed to APOBEC3G activity

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Viral RNA annealing activities of human immunodeficiency virus type 1 nucleocapsid protein require only peptide domains outside the zinc fingers

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Studies on primer binding of HIV-1 reverse transcriptase using a fluorescent probe

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Functional differences between the human LINE retrotransposon and retroviral reverse transcriptases for in vivo mRNA reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Characterization of highly immunogenic p66/p51 as the reverse transcriptase of HTLV-III/LAV.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Cross-linking localization of a HIV-1 reverse transcriptase peptide involved in the binding of primer tRNALys3.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Probing the importance of tRNA anticodon: human immunodeficiency virus type 1 (HIV-1) RNA genome complementarity with an HIV-1 that selects tRNA(Glu) for replication

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Sequence specificity of viral end DNA binding by HIV-1 integrase reveals critical regions for protein-DNA interaction

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

The human immunodeficiency virus type 1 Gag polyprotein has nucleic acid chaperone activity: possible role in dimerization of genomic RNA and placement of tRNA on the primer binding site

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Initiation of HIV-2 reverse transcription: a secondary structure model of the RNA-tRNA(Lys3) duplex

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Effect of altering the tRNA(Lys)(3) concentration in human immunodeficiency virus type 1 upon its annealing to viral RNA, GagPol incorporation, and viral infectivity

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Does the HIV-1 primer activation signal interact with tRNA3(Lys) during the initiation of reverse transcription?

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Structural variability of the initiation complex of HIV-1 reverse transcription.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Specific inhibition of the synthesis of human lysyl-tRNA synthetase results in decreases in tRNA(Lys) incorporation, tRNA(3)(Lys) annealing to viral RNA, and viral infectivity in human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Genome organization and transactivation of the human immunodeficiency virus type 2.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Cellular distribution of Lysyl-tRNA synthetase and its interaction with Gag during human immunodeficiency virus type 1 assembly

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

HIV-1 nucleocapsid protein zinc finger structures induce tRNA(Lys,3) structural changes but are not critical for primer/template annealing

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Interaction of tryptophan tRNA and avian myeloblastosis virus reverse transcriptase: further characterization of the binding reaction

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Incorporation of excess wild-type and mutant tRNA(3Lys) into human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Primer tRNA3Lys on the viral genome exists in unextended and two-base extended forms within mature human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Mutations in the central polypurine tract of HIV-1 result in delayed replication

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

On the importance of the primer activation signal for initiation of tRNA(lys3)-primed reverse transcription of the HIV-1 RNA genome

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Initiation of reverse transcription of HIV-1: secondary structure of the HIV-1 RNA/tRNA(3Lys) (template/primer)

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Mutational analysis of the tRNA3Lys/HIV-1 RNA (primer/template) complex.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Structural basis for the specificity of the initiation of HIV-1 reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Efficient initiation of HIV-1 reverse transcription in vitro. Requirement for RNA sequences downstream of the primer binding site abrogated by nucleocapsid protein-dependent primer-template interactions

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Correlation between tRNALys3 aminoacylation and its incorporation into HIV-1.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

The interaction between HIV-1 Gag and human lysyl-tRNA synthetase during viral assembly

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Variable tRNA content in HIV-1IIIB.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Identification of tRNAs incorporated into wild-type and mutant human immunodeficiency virus type 1

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Mutations in both the U5 region and the primer-binding site influence the selection of the tRNA used for the initiation of HIV-1 reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Identification of a human immunodeficiency virus type 1 that stably uses tRNALys1,2 rather than tRNALys,3 for initiation of reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Sequences within Pr160gag-pol affecting the selective packaging of primer tRNA(Lys3) into HIV-1

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Reverse transcriptase of human immunodeficiency virus can use either human tRNA(3Lys) or Escherichia coli tRNA(2Gln) as a primer in an in vitro primer-utilization assay

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Hairpin-induced tRNA-mediated (HITME) recombination in HIV-1.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

In VitroCharacterization of the Interaction between HIV-1 Gag and Human Lysyl-tRNA Synthetase

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Dynamics of the HIV-1 Reverse Transcription Complex during Initiation of DNA Synthesis

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Effect of polymerase mutations on packaging of primer tRNAPro during murine leukemia virus assembly

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Nucleic acid chaperone activity of HIV-1 nucleocapsid protein: critical role in reverse transcription and molecular mechanism

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Stability of HIV type 1 proviral genomes that contain two distinct primer-binding sites

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Insights into the interaction between tRNA and primer binding site from characterization of a unique HIV-1 virus which stably maintains dual PBS complementary to tRNA(Gly) and tRNA(His).

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Sequence elements downstream of the human immunodeficiency virus type 1 long terminal repeat are required for efficient viral gene transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Mechanistic studies of early pausing events during initiation of HIV-1 reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Mutated primer binding sites interacting with different tRNAs allow efficient murine leukemia virus replication

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Selection of functional tRNA primers and primer binding site sequences from a retroviral combinatorial library: identification of new functional tRNA primers in murine leukemia virus replication

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Role of Pr160gag-pol in mediating the selective incorporation of tRNA(Lys) into human immunodeficiency virus type 1 particles

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

tRNAs as primer of reverse transcriptases

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Synthetic tRNALys,3 as the replication primer for the HIV-1HXB2 and HIV-1Mal genomes

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Site-specific crosslinking of 4-thiouridine-modified human tRNA(3Lys) to reverse transcriptase from human immunodeficiency virus type I.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Preferences for the selection of unique tRNA primers revealed from analysis of HIV-1 replication in peripheral blood mononuclear cells

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Replication of avian sarcoma virus in vivo requires an interaction between the viral RNA and the TpsiC loop of the tRNA(Trp) primer

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

The availability of the primer activation signal (PAS) affects the efficiency of HIV-1 reverse transcription initiation.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Structural requirements for the binding of tRNA Lys3 to reverse transcriptase of the human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

HIV-1 reverse transcriptase discriminates against non-self tRNA primers

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Reverse transcriptase as the major determinant for selective packaging of tRNA's into Avian sarcoma virus particles

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Effects of tRNA3Lys aminoacylation on the initiation of HIV-1 reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Interactions with tRNALysinduce important structural changes in human immunodeficiency virus reverse transcriptase

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Processing of an HIV replication intermediate by the human DNA replication enzyme FEN1

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Preferential interaction of human immunodeficiency virus reverse transcriptase with two regions of primer tRNA(Lys) as evidenced by footprinting studies and inhibition with synthetic oligoribonucleotides

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Small RNAs of Rous sarcoma virus: characterization by two-dimensional polyacrylamide gel electrophoresis and fingerprint analysis

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Recombination between a defective retrovirus and homologous sequences in host DNA: reversion by patch repair

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Localization of a polynucleotide binding region in the HIV-1 reverse transcriptase: implications for primer binding

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Compilation of tRNA sequences and sequences of tRNA genes

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Heteronuclear NMR studies of the interaction of tRNA3Lys with HIV-1 nucleocapsid protein11Edited by M. F. Summers

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Frequent dual initiation in human immunodeficiency virus-based vectors containing two primer-binding sites: a quantitative in vivo assay for function of initiation complexes.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Nucleotide sequence of the AIDS virus, LAV

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Mutations within the primer binding site of the human immunodeficiency virus type 1 define sequence requirements essential for reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Human immunodeficiency virus type 1 can use different tRNAs as primers for reverse transcription but selectively maintains a primer binding site complementary to tRNA(3Lys)

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

The HIV-1 reverse transcriptase mutants G190S and G190A, which confer resistance to non-nucleoside reverse transcriptase inhibitors, demonstrate reductions in RNase H activity and DNA synthesis from tRNA(Lys, 3) that correlate with reductions in rep

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Transfer RNA into RNA tumor viruses

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Defective replication in human immunodeficiency virus type 1 when non-primers are used for reverse transcription.

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

An expanded model of replicating human immunodeficiency virus reverse transcriptase

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

The G490E mutation in reverse transcriptase does not impact tRNA primer selection by HIV-1 with altered PBS and A-loop

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Few mutations in the 5' leader region mediate fitness recovery of debilitated human immunodeficiency type 1 viruses

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Nucleotide sequences within the U5 region of the viral RNA genome are the major determinants for an human immunodeficiency virus type 1 to maintain a primer binding site complementary to tRNA(His).

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

Primer tRNAs for reverse transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1054-3589%2807%2955003-9

7 January 2021

10.1016/S1054-3589(07)55003-9

Identifiers

DOI

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16 August 2017

1 reference