(Q37004886)

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Genotyping-by-Sequencing SNP Identification for Crops without a Reference Genome: Using Transcriptome Based Mapping as an Alternative Strategy

scientific article published on 15 June 2016

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

17 August 2017

Genotyping-by-Sequencing SNP Identification for Crops without a Reference Genome: Using Transcriptome Based Mapping as an Alternative Strategy (English)

1 reference

Europe PubMed Central

PMC publication ID

17 August 2017

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Cécile Berthouly-Salazar

object named as

Cécile Berthouly-Salazar

1

0 references

object named as

Cédric Mariac

2

0 references

object named as

Yves Vigouroux

6

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author name string

Marie Couderc

3

1 reference

Europe PubMed Central

PMC publication ID

17 August 2017

Juliette Pouzadoux

4

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Europe PubMed Central

PMC publication ID

17 August 2017

Jean-Baptiste Floc'h

5

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Europe PubMed Central

PMC publication ID

17 August 2017

publication date

15 June 2016

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Europe PubMed Central

PMC publication ID

17 August 2017

Frontiers in Plant Science

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Europe PubMed Central

PMC publication ID

17 August 2017

7

1 reference

Europe PubMed Central

PMC publication ID

17 August 2017

777

1 reference

Europe PubMed Central

PMC publication ID

17 August 2017

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1 reference

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1 reference

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1 reference

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Similarity thresholds used in DNA sequence assembly from short reads can reduce the comparability of population histories across species

1 reference

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1 reference

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ANGSD: Analysis of Next Generation Sequencing Data.

1 reference

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1 reference

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1 reference

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Genome sequencing and population genomics in non-model organisms

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RADseq underestimates diversity and introduces genealogical biases due to nonrandom haplotype sampling

1 reference

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1 reference

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Bioinformatics challenges in de novo transcriptome assembly using short read sequences in the absence of a reference genome sequence.

1 reference

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1 reference

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Population genomics based on low coverage sequencing: how low should we go?

1 reference

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Special features of RAD Sequencing data: implications for genotyping

1 reference

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A high-performance computing toolset for relatedness and principal component analysis of SNP data

1 reference

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SNP calling, genotype calling, and sample allele frequency estimation from New-Generation Sequencing data

1 reference

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adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

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Genotype and SNP calling from next-generation sequencing data

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10.3389/FPLS.2016.00777

1 reference

Europe PubMed Central

PMC publication ID

17 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

17 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

17 August 2017

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