(Q37036085)

17 August 2017

The Cardiac TBX5 Interactome Reveals a Chromatin Remodeling Network Essential for Cardiac Septation (English)

1 reference

Chromodomain helicase DNA binding protein 4

17 August 2017

1 reference

GOA release 2020-03-11

T-box 5

1 reference

GOA release 2020-03-11

Jeffrey D Steimle

2

0 references

author name string

Lauren Waldron

1

1 reference

17 August 2017

Todd M Greco

3

1 reference

17 August 2017

Nicholas C Gomez

4

1 reference

17 August 2017

Kerry M Dorr

5

1 reference

17 August 2017

Junghun Kweon

6

1 reference

17 August 2017

Brenda Temple

7

1 reference

17 August 2017

Xinan Holly Yang

8

1 reference

17 August 2017

Caralynn M Wilczewski

9

1 reference

17 August 2017

Ian J Davis

10

1 reference

17 August 2017

Ileana M Cristea

11

1 reference

17 August 2017

Ivan P Moskowitz

12

1 reference

17 August 2017

Frank L Conlon

13

1 reference

17 August 2017

language of work or name

English

0 references

publication date

1 February 2016

1 reference

17 August 2017

14

1 reference

inferred from page(s)

published in

Developmental Cell

1 reference

17 August 2017

36

1 reference

17 August 2017

262-275

1 reference

17 August 2017

3

1 reference

describes a project that uses

17 August 2017

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

cites work

Casz1 is required for cardiomyocyte G1-to-S phase progression during mammalian cardiac development

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Foxf genes integrate tbx5 and hedgehog pathways in the second heart field for cardiac septation

29 September 2017

1 reference

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Glutamic acid decarboxylase 1 alternative splicing isoforms: characterization, expression and quantification in the mouse brain

29 September 2017

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Morphogenesis and molecular considerations on congenital cardiac septal defects

29 September 2017

1 reference

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Infiltrating T cells promote prostate cancer metastasis via modulation of FGF11→miRNA-541→androgen receptor (AR)→MMP9 signaling

29 September 2017

1 reference

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Functional significance of K+ channel β-subunit KCNE3 in auditory neurons

29 September 2017

1 reference

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Target analysis by integration of transcriptome and ChIP-seq data with BETA.

29 September 2017

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Glutamate acid decarboxylase 1 promotes metastasis of human oral cancer by β-catenin translocation and MMP7 activation.

29 September 2017

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Concurrent gene signatures for han chinese breast cancers

29 September 2017

1 reference

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A Gro/TLE-NuRD corepressor complex facilitates Tbx20-dependent transcriptional repression

29 September 2017

1 reference

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MEF2B mutations lead to deregulated expression of the oncogene BCL6 in diffuse large B cell lymphoma

29 September 2017

1 reference

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

29 September 2017

1 reference

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STRING v9.1: protein-protein interaction networks, with increased coverage and integration

29 September 2017

1 reference

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In vivo reprogramming of murine cardiac fibroblasts into induced cardiomyocytes

29 September 2017

1 reference

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Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

29 September 2017

1 reference

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Synergistic activation of cardiac genes by myocardin and Tbx5.

29 September 2017

1 reference

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Myocyte proliferation in the developing heart

29 September 2017

1 reference

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Co-occupancy by multiple cardiac transcription factors identifies transcriptional enhancers active in heart.

29 September 2017

1 reference

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A high-resolution anatomical atlas of the transcriptome in the mouse embryo

29 September 2017

1 reference

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CASZ1, a candidate tumor-suppressor gene, suppresses neuroblastoma tumor growth through reprogramming gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

The prevalence of congenital anomalies in Europe

29 September 2017

1 reference

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Specialized compartments of cardiac nuclei exhibit distinct proteomic anatomy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Regulation of DNA-damage responses and cell-cycle progression by the chromatin remodelling factor CHD4

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Direct reprogramming of fibroblasts into functional cardiomyocytes by defined factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

A bimolecular affinity purification method under denaturing conditions for rapid isolation of a ubiquitinated protein for mass spectrometry analysis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Structural basis of TBX5-DNA recognition: the T-box domain in its DNA-bound and -unbound form

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

TAPP2 links phosphoinositide 3-kinase signaling to B-cell adhesion through interaction with the cytoskeletal protein utrophin: expression of a novel cell adhesion-promoting complex in B-cell leukemia

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

TagDust--a program to eliminate artifacts from next generation sequencing data

29 September 2017

1 reference

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The Sequence Alignment/Map format and SAMtools

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Use of in vivo biotinylation to study protein-protein and protein-DNA interactions in mouse embryonic stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Physical interaction between TBX5 and MEF2C is required for early heart development.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Model-based analysis of ChIP-Seq (MACS)

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Roles of Krüpel-like factor 4 in normal homeostasis, cancer and stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Integration of biological networks and gene expression data using Cytoscape

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

The human Mi-2/NuRD complex and gene regulation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

A molecular pathway including Id2, Tbx5, and Nkx2-5 required for cardiac conduction system development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

A protein interaction network for pluripotency of embryonic stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

TBX5 is required for embryonic cardiac cell cycle progression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

The use of biotin tagging in Saccharomyces cerevisiae improves the sensitivity of chromatin immunoprecipitation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

TBX5 genetic testing validates strict clinical criteria for Holt-Oram syndrome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Fluorescent proteins as proteomic probes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

The human TBX5 gene mutation database

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Tbx5 and Tbx20 act synergistically to control vertebrate heart morphogenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

The T-Box transcription factor Tbx5 is required for the patterning and maturation of the murine cardiac conduction system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

TBX5 mutations and congenital heart disease: Holt-Oram syndrome revealed.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Familial heart disease with skeletal malformations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

GATA4 mutations cause human congenital heart defects and reveal an interaction with TBX5

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Novel TBX5 mutations and molecular mechanism for Holt-Oram syndrome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Functional analysis of TBX5 missense mutations associated with Holt-Oram syndrome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

A murine model of Holt-Oram syndrome defines roles of the T-box transcription factor Tbx5 in cardiogenesis and disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Tbx5 associates with Nkx2-5 and synergistically promotes cardiomyocyte differentiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

The mutation spectrum in Holt-Oram syndrome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

TBX5 transcription factor regulates cell proliferation during cardiogenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Activation of RNA polymerase II transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Different TBX5 interactions in heart and limb defined by Holt-Oram syndrome mutations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

A multiple subunit Mi-2 histone deacetylase from Xenopus laevis cofractionates with an associated Snf2 superfamily ATPase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Mutations in human TBX5 [corrected] cause limb and cardiac malformation in Holt-Oram syndrome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Holt-Oram syndrome is caused by mutations in TBX5, a member of the Brachyury (T) gene family

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

New understandings in the genetics of congenital heart disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Fibroblast growth factor (FGF) homologous factors: new members of the FGF family implicated in nervous system development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Genomic organization, chromosome location, and expression analysis of mouse beta-synuclein, a candidate for involvement in neurodegeneration.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Deaths: leading causes for 2005.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

A simple and loss-free method to remove TRIzol contaminations from minute RNA samples

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

A generic tool for biotinylation of tagged proteins in transgenic mice

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Efficient gene modulation in mouse epiblast using a Sox2Cre transgenic mouse strain

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Chamber-specific cardiac expression of Tbx5 and heart defects in Holt-Oram syndrome.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

dMi-2, a hunchback-interacting protein that functions in polycomb repression.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Holt-Oram syndrome with intermediate atrioventricular canal defect, and aortic coarctation: functional characterization of a de novo TBX5 mutation

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

In vivo protein biotinylation and sample preparation for the proteomic identification of organ- and disease-specific antigens accessible from the vasculature

20 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4920128

Distribution of the auxiliary GABAB receptor subunits KCTD8, 12, 12b, and 16 in the mouse brain

4 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26859351

12 December 2020

inferred from PubMed ID database lookup

The clinical and genetic spectrum of the Holt-Oram syndrome (heart-hand syndrome)

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26859351

12 December 2020

inferred from PubMed ID database lookup

The use of the avidin-biotin complex as a tool in molecular biology

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26859351

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1016/J.DEVCEL.2016.01.009

1 reference

17 August 2017

1 reference

17 August 2017

1 reference