(Q37087609)

18 August 2017

1 reference

title

Organization of conserved elements near key developmental regulators in vertebrate genomes (English)

1 reference

18 August 2017

2

1 reference

18 August 2017

Adam Woolfe

1

1 reference

18 August 2017

1 January 2008

1 reference

18 August 2017

1 reference

18 August 2017

61

1 reference

18 August 2017

307-338

1 reference

Mapping cis-regulatory domains in the human genome using multi-species conservation of synteny.

18 August 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Conservation anchors in the vertebrate genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Detecting conserved regulatory elements with the model genome of the Japanese puffer fish, Fugu rubripes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Organization of the Fugu rubripes Hox clusters: evidence for continuing evolution of vertebrate Hox complexes.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Comparative genomics of the SOX9 region in human and Fugu rubripes: conservation of short regulatory sequence elements within large intergenic regions

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Ultraconserved Elements in the Human Genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A distal enhancer and an ultraconserved exon are derived from a novel retroposon

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A transgenic insertion upstream of sox9 is associated with dominant XX sex reversal in the mouse.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Comparative genomics at the vertebrate extremes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Characterization of the pufferfish (Fugu) genome as a compact model vertebrate genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Fast and sensitive multiple alignment of large genomic sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Glocal alignment: finding rearrangements during alignment

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Functional bias and spatial organization of genes in mutational hot and cold regions in the human genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Strategies and tools for whole-genome alignments

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A genomic regulatory network for development

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Evolutionary discrimination of mammalian conserved non-genic sequences (CNGs).

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Conserved non-genic sequences - an unexpected feature of mammalian genomes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Conserved noncoding sequences are selectively constrained and not mutation cold spots

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Active conservation of noncoding sequences revealed by three-way species comparisons

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Searching for regulatory elements in human noncoding sequences.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Hunting with traps: genome-wide strategies for gene discovery and functional analysis

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Small is beautiful: comparative genomics with the pufferfish (Fugu rubripes).

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Large-scale enhancer detection in the zebrafish genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Noncoding sequences conserved in a limited number of mammals in the SIM2 interval are frequently functional

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Regulatory roles of conserved intergenic domains in vertebrate Dlx bigene clusters.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Highly conserved regulatory elements around the SHH gene may contribute to the maintenance of conserved synteny across human chromosome 7q36.3.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Analysis of vertebrate SCL loci identifies conserved enhancers

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

New 3' elements control Pax6 expression in the developing pretectum, neural retina and olfactory region.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Long Human–Mouse Sequence Alignments Reveal Novel Regulatory Elements: A Reason to Sequence the Mouse Genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

An internal enhancer regulates heme- and cadmium-mediated induction of human heme oxygenase-1.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Domain disruption and mutation of the bZIP transcription factor, MAF, associated with cataract, ocular anterior segment dysgenesis and coloboma

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Distal enhancer elements transcribe intergenic RNA in the IL-10 family gene cluster

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Distinct cis-essential modules direct the time-space pattern of the Pax6 gene activity.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Long-range control of gene expression: emerging mechanisms and disruption in disease

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Xenopus as a model system to study transcriptional regulatory networks

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Gene regulatory networks for development

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A genetic regulatory network for Xenopus mesendoderm formation

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Identification of a Coordinate Regulator of Interleukins 4, 13, and 5 by Cross-Species Sequence Comparisons

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Identification and characterization of multi-species conserved sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Differences between pair-wise and multi-sequence alignment methods affect vertebrate genome comparisons

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A conserved retinoic acid response element required for early expression of the homeobox gene Hoxb-1.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Computational identification of protein coding potential of conserved sequence tags through cross-species evolutionary analysis

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Complete sequencing of the Fugu WAGR region from WT1 to PAX6: dramatic compaction and conservation of synteny with human chromosome 11p13.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Search for enhancers: teleost models in comparative genomic and transgenic analysis of cis regulatory elements

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Scanning Human Gene Deserts for Long-Range Enhancers

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Megabase deletions of gene deserts result in viable mice

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

The role of binding site cluster strength in Bicoid-dependent patterning in Drosophila.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Large-scale comparative sequence analysis of the human and murine Bruton's tyrosine kinase loci reveals conserved regulatory domains

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

ECR Browser: a tool for visualizing and accessing data from comparisons of multiple vertebrate genomes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Evolution and functional classification of vertebrate gene deserts

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Genomic strategies to identify mammalian regulatory sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

In vivo characterization of a vertebrate ultraconserved enhancer

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Shuffling of cis-regulatory elements is a pervasive feature of the vertebrate lineage

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Comparative analysis of the genomic organization of Pax9 and its conserved physical association with Nkx2-9 in the human, mouse, and pufferfish genomes.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Implications of human genome architecture for rearrangement-based disorders: the genomic basis of disease

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Unraveling genomic regulatory networks in the simple chordate, Ciona intestinalis

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Transposon-free regions in mammalian genomes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Analysis of intronic conserved elements indicates that functional complexity might represent a major source of negative selection on non-coding sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A novel algorithm for computational identification of contaminated EST libraries

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A global control region defines a chromosomal regulatory landscape containing the HoxD cluster

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Conserved distances between vertebrate highly conserved elements.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Orientation-dependent influence of an intergenic enhancer on the promoter activity of the divergently transcribed mouse Shsp/alpha B-crystallin and Mkbp/HspB2 genes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Evolution of transcriptional regulation

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Genome duplication, a trait shared by 22000 species of ray-finned fish

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Comparative analyses of multi-species sequences from targeted genomic regions

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Defining a genomic radius for long-range enhancer action: duplicated conserved non-coding elements hold the key

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Parallel evolution of conserved non-coding elements that target a common set of developmental regulatory genes from worms to humans

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A compact cartilaginous fish model genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Ancient noncoding elements conserved in the human genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Human-mouse genome comparisons to locate regulatory sites

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Initial sequencing and comparative analysis of the mouse genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

Highly conserved non-coding sequences are associated with vertebrate development

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

A family of conserved noncoding elements derived from an ancient transposable element

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

CONDOR: a database resource of developmentally associated conserved non-coding elements

1 reference

https://api.crossref.org/works/10.1016%2FS0065-2660%2807%2900012-0

7 January 2021

10.1016/S0065-2660(07)00012-0

Identifiers

DOI

1 reference

18 August 2017

1 reference

PubMed ID

18282512