(Q37099783)

18 August 2017

Mechanism of HIV-1 RNA dimerization in the central region of the genome and significance for viral evolution (English)

1 reference

18 August 2017

Dorota Piekna-Przybylska

series ordinal

1

object named as

Dorota Piekna-Przybylska

1 reference

18 August 2017

Gaurav Sharma

2

1 reference

18 August 2017

Robert A Bambara

series ordinal

3

1 reference

18 August 2017

language of work or name

English

0 references

publication date

9 July 2013

1 reference

Journal of Biological Chemistry

18 August 2017

1 reference

18 August 2017

288

1 reference

18 August 2017

33

1 reference

18 August 2017

24140-24150

1 reference

describes a project that uses

18 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3745356/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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HIV-1 nucleocapsid protein increases strand transfer recombination by promoting dimeric G-quartet formation

14 September 2017

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Evidence of the formation of G-quadruplex structures in the promoter region of the human vascular endothelial growth factor gene

14 September 2017

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Probing the HIV-1 genomic RNA trafficking pathway and dimerization by genetic recombination and single virion analyses

14 September 2017

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A recombination hot spot in HIV-1 contains guanosine runs that can form a G-quartet structure and promote strand transfer in vitro

14 September 2017

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The G-quartet containing FMRP binding site in FMR1 mRNA is a potent exonic splicing enhancer

14 September 2017

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An RNA G-quadruplex in the 5' UTR of the NRAS proto-oncogene modulates translation

14 September 2017

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Dimer initiation signal of human immunodeficiency virus type 1: its role in partner selection during RNA copackaging and its effects on recombination

14 September 2017

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Telomerase downregulation induced by the G-quadruplex ligand 12459 in A549 cells is mediated by hTERT RNA alternative splicing.

14 September 2017

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Two-repeat human telomeric d(TAGGGTTAGGGT) sequence forms interconverting parallel and antiparallel G-quadruplexes in solution: distinct topologies, thermodynamic properties, and folding/unfolding kinetics

14 September 2017

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Template dimerization promotes an acceptor invasion-induced transfer mechanism during human immunodeficiency virus type 1 minus-strand synthesis

14 September 2017

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G-quartets assembly within a G-rich DNA flap. A possible event at the center of the HIV-1 genome

14 September 2017

1 reference

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Human immunodeficiency virus type 1 recombination: rate, fidelity, and putative hot spots

14 September 2017

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Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription

14 September 2017

1 reference

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14 September 2017

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The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif

14 September 2017

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Impact of human immunodeficiency virus type 1 RNA dimerization on viral infectivity and of stem-loop B on RNA dimerization and reverse transcription and dissociation of dimerization from packaging

14 September 2017

1 reference

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Moloney murine sarcoma virus genomic RNAs dimerize via a two-step process: a concentration-dependent kissing-loop interaction is driven by initial contact between consecutive guanines

14 September 2017

1 reference

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Studies of the genomic RNA of leukosis viruses: implications for RNA dimerization

14 September 2017

1 reference

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Mutations in the kissing-loop hairpin of human immunodeficiency virus type 1 reduce viral infectivity as well as genomic RNA packaging and dimerization

14 September 2017

1 reference

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A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA

14 September 2017

1 reference

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The human immunodeficiency virus type 1 encapsidation site is a multipartite RNA element composed of functional hairpin structures

14 September 2017

1 reference

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Evidence for interstrand quadruplex formation in the dimerization of human immunodeficiency virus 1 genomic RNA

14 September 2017

1 reference

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Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Dimerization of human immunodeficiency virus type 1 RNA involves sequences located upstream of the splice donor site.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Secondary structural features in the 70S RNAs of Moloney murine leukemia and Rous sarcoma viruses as observed by electron microscopy.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Structure and molecular weight of the 60-70S RNA and the 30-40S RNA of the Rous sarcoma virus

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Dimerization of human immunodeficiency virus (type 1) RNA: stimulation by cations and possible mechanism

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

High-molecular-weight RNAs of AKR, NZB, and wild mouse viruses and avian reticuloendotheliosis virus all have similar dimer structures

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C oncornavirus RNA molecules

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Role for G-quadruplex RNA binding by Epstein-Barr virus nuclear antigen 1 in DNA replication and metaphase chromosome attachment

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

HIV-1 viral RNA is selected in the form of monomers that dimerize in a three-step protease-dependent process; the DIS of stem-loop 1 initiates viral RNA dimerization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Mutant human immunodeficiency virus type 1 genomes with defects in RNA dimerization or encapsidation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Effects of cation substitutions on reverse transcriptase and on human immunodeficiency virus production

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

G-quartet structures in telomeric DNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

RD-114, baboon, and woolly monkey viral RNAs compared in size and structure

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Optimal conditions for synthesizing complementary DNA in the HIV-1 endogenous reverse transcriptase reaction

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

G-quadruplex structures in TP53 intron 3: role in alternative splicing and in production of p53 mRNA isoforms.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

G-quadruplex DNA assemblies: loop length, cation identity, and multimer formation

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Circular dichroism of quadruplex DNAs: applications to structure, cation effects and ligand binding

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Identification of a preferred region for recombination and mutation in HIV-1 gag.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

Role of methionine 184 of human immunodeficiency virus type-1 reverse transcriptase in the polymerase function and fidelity of DNA synthesis.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3745356

The distribution of HIV-1 recombination breakpoints

3 September 2018

1 reference

12 December 2020

Steps of the acceptor invasion mechanism for HIV-1 minus strand strong stop transfer

1 reference

12 December 2020

Mode of dimerization of HIV-1 genomic RNA

1 reference

12 December 2020

Ultrastructure of HIV-1 genomic RNA

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M113.477265

1 reference

18 August 2017

1 reference

18 August 2017

PubMed publication ID

23839990

1 reference