(Q37099978)

English

Trypanosoma brucei spliced leader RNA maturation by the cap 1 2'-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex

scientific article published on 22 December 2008

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Trypanosoma brucei spliced leader RNA maturation by the cap 1 2'-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex (English)

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Trypanosoma brucei

0 references

methylthioadenosine phosphorylase, putative

1 reference

5 February 2019

methylthioadenosine phosphorylase, putative

1 reference

6 February 2019

Methyltransferase-associated protein

1 reference

7 February 2019

methylthioadenosine phosphorylase, putative

0 references

methylthioadenosine phosphorylase, putative

0 references

methylthioadenosine phosphorylase, putative

0 references

methylthioadenosine phosphorylase, putative

0 references

Bidyottam Mittra

2

object named as

Bidyottam Mittra

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

author name string

Jesse R Zamudio

1

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Arnab Chattopadhyay

3

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

James A Wohlschlegel

4

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Nancy R Sturm

5

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

David A Campbell

6

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Europe PubMed Central

PMC publication ID

18 August 2017

language of work or name

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publication date

22 December 2008

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Europe PubMed Central

PMC publication ID

18 August 2017

Molecular and Cellular Biology

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Europe PubMed Central

PMC publication ID

18 August 2017

29

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Europe PubMed Central

PMC publication ID

18 August 2017

5

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

1202-1211

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Identification and characterization of two trypanosome TFIIS proteins exhibiting particular domain architectures and differential nuclear localizations

1 reference

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14 September 2017

Mutations in the telomerase component NHP2 cause the premature ageing syndrome dyskeratosis congenita

1 reference

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14 September 2017

Evidence for a capping enzyme with specificity for the trypanosome spliced leader RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Characterization of the Trypanosoma brucei cap hypermethylase Tgs1

1 reference

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14 September 2017

The 2'-O-ribose methyltransferase for cap 1 of spliced leader RNA and U1 small nuclear RNA in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

The exosome and RNA quality control in the nucleus

1 reference

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14 September 2017

The promoter and transcribed regions of the Leishmania tarentolae spliced leader RNA gene array are devoid of nucleosomes

1 reference

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14 September 2017

Structural design of cage and coat scaffolds that direct membrane traffic

1 reference

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14 September 2017

Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs

1 reference

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14 September 2017

Functional characterization of a 48 kDa Trypanosoma brucei cap 2 RNA methyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Complete cap 4 formation is not required for viability in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

How a single protein complex accommodates many different H/ACA RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Highly efficient tandem affinity purification of trypanosome protein complexes based on a novel epitope combination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

The Genome of the African Trypanosome Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

The cotranscriptional assembly of snoRNPs controls the biosynthesis of H/ACA snoRNAs in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

A genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Trypanosoma brucei reveals a trypanosome-specific pattern of rRNA modification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Characterization and purification of Saccharomyces cerevisiae RNase MRP reveals a new unique protein component

1 reference

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14 September 2017

Spb1p-directed formation of Gm2922 in the ribosome catalytic center occurs at a late processing stage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

GeneDB: a resource for prokaryotic and eukaryotic organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Exportin 1 mediates nuclear export of the kinetoplastid spliced leader RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Uridine insertion/deletion RNA editing in trypanosome mitochondria: a complex business

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

RNA-guided nucleotide modification of ribosomal and other RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Determinants of the interaction of the spinal muscular atrophy disease protein SMN with the dimethylarginine-modified box H/ACA small nucleolar ribonucleoprotein GAR1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

The Shq1p.Naf1p complex is required for box H/ACA small nucleolar ribonucleoprotein particle biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

rRNA modifications and ribosome function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Shotgun identification of protein modifications from protein complexes and lens tissue

1 reference

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14 September 2017

Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Trm7p catalyses the formation of two 2'-O-methylriboses in yeast tRNA anticodon loop

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

The survival of motor neurons (SMN) protein interacts with the snoRNP proteins fibrillarin and GAR1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Identification of the first trypanosome H/ACA RNA that guides pseudouridine formation on rRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

The exosome of Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

A small nucleolar guide RNA functions both in 2'-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Viral and cellular mRNA capping: past and prospects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Mammalian telomeres and telomerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Cbf5p, a potential pseudouridine synthase, and Nhp2p, a putative RNA-binding protein, are present together with Gar1p in all H BOX/ACA-motif snoRNPs and constitute a common bipartite structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Three small nucleolar RNAs identified from the spliced leader-associated RNA locus in kinetoplastid protozoans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Cap ribose methylation of c-mos mRNA stimulates translation and oocyte maturation in Xenopus laevis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Trypanosome mRNAs have unusual "cap 4" structures acquired by addition of a spliced leader

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Trans splicing in trypanosomes requires methylation of the 5' end of the spliced leader RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

14 September 2017

Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

29 September 2017

3'-End polishing of the kinetoplastid spliced leader RNA is performed by SNIP, a 3'-->5' exonuclease with a Motley assortment of small RNA substrates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

29 September 2017

SmD1 is required for spliced leader RNA biogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

29 September 2017

A protein related to the vaccinia virus cap-specific methyltransferase VP39 is involved in cap 4 modification in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

Actively transcribing RNA polymerase II concentrates on spliced leader genes in the nucleus of Trypanosoma cruzi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

Cotranscriptional recruitment of the pseudouridylsynthetase Cbf5p and of the RNA binding protein Naf1p during H/ACA snoRNP assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

The Leishmania tarentolae spliced leader contains determinants for association with polysomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

The role of intron structures in trans-splicing and cap 4 formation for the Leishmania spliced leader RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

Efficient trans-splicing of mutated spliced leader exons in Leishmania tarentolae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: analysis by the application of a new sequencing technique.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

Discontinuously synthesized mRNA from Trypanosoma brucei contains the highly methylated 5' cap structure, m7GpppA*A*C(2'-O)mU*A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

Mass spectrometry of mRNA cap 4 from trypanosomatids reveals two novel nucleosides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

New culture medium for maintenance of tsetse tissues and growth of trypanosomatids.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

27 June 2018

The TbMTr1 spliced leader RNA cap 1 2'-O-ribose methyltransferase from Trypanosoma brucei acts with substrate specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

3 September 2018

Control and regulation of gene expression: quantitative analysis of the expression of phosphoglycerate kinase in bloodstream form Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

3 September 2018

2'-O-methylation of position 2 of the trypanosome spliced leader cap 4 is mediated by a 48 kDa protein related to vaccinia virus VP39.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2643836

3 September 2018

Crystal structure of a Cbf5-Nop10-Gar1 complex and implications in RNA-guided pseudouridylation and dyskeratosis congenita.

1 reference

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3 September 2018

A vector series for rapid PCR-mediated C-terminal in situ tagging of Trypanosoma brucei genes.

1 reference

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3 September 2018

Elucidating the role of H/ACA-like RNAs in trans-splicing and rRNA processing via RNA interference silencing of the Trypanosoma brucei CBF5 pseudouridine synthase

1 reference

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3 September 2018

Transcription of Leishmania major Friedlin chromosome 1 initiates in both directions within a single region.

1 reference

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3 September 2018

Dyskeratosis congenita and cancer in mice deficient in ribosomal RNA modification

1 reference

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3 September 2018

Functional analysis of the trypanosomal AAA protein TbVCP with trans-dominant ATP hydrolysis mutants

1 reference

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3 September 2018

Spliced leader-associated RNA of trypanosomes. Sequence conservation and association with protein components common to trans-spliceosomal ribonucleoproteins

1 reference

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3 September 2018

Isolation and characterization of the small nucleolar ribonucleoprotein particle snR30 from Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inactivation of transcription by UV irradiation of T. brucei provides evidence for a multicistronic transcription unit including a VSG gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of the heptameric Lsm complex that binds U6 snRNA in Trypanosoma brucei

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accurate modification of the trypanosome spliced leader cap structure in a homologous cell-free system

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

On the role of exon and intron sequences in trans-splicing utilization and cap 4 modification of the trypanosomatid Leptomonas collosoma SL RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of Trypanosoma brucei gene expression by RNA interference using an integratable vector with opposing T7 promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Silencing of Sm proteins in Trypanosoma brucei by RNA interference captured a novel cytoplasmic intermediate in spliced leader RNA biogenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteomic Analysis by Multidimensional Protein Identification Technology

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cotranscriptional Cap 4 Formation on theTrypanosoma bruceiSpliced Leader RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/19103757

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.01496-08

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

ResearchGate publication ID

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