(Q37127891)

English

Identifying sites bound by Epstein-Barr virus nuclear antigen 1 (EBNA1) in the human genome: defining a position-weighted matrix to predict sites bound by EBNA1 in viral genomes

scientific article published on 07 January 2009

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Identifying sites bound by Epstein-Barr virus nuclear antigen 1 (EBNA1) in the human genome: defining a position-weighted matrix to predict sites bound by EBNA1 in viral genomes (English)

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Epstein–Barr virus

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author name string

Lindsay R Dresang

1

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

David T Vereide

2

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Bill Sugden

3

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

language of work or name

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publication date

7 January 2009

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Journal of Virology

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Europe PubMed Central

PMC publication ID

18 August 2017

83

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

7

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

2930-2940

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Identifying a property of origins of DNA synthesis required to support plasmids stably in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

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The affinity of EBNA1 for its origin of DNA synthesis is a determinant of the origin's replicative efficiency

1 reference

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Down-regulation of the TGF-beta target gene, PTPRK, by the Epstein-Barr virus encoded EBNA1 contributes to the growth and survival of Hodgkin lymphoma cells.

1 reference

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Transcriptional activation by EBV nuclear antigen 1 is essential for the expression of EBV's transforming genes

1 reference

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MEME: discovering and analyzing DNA and protein sequence motifs

1 reference

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Genome-wide identification of direct targets of the Drosophila retinal determination protein Eyeless

1 reference

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Epstein-Barr virus sustains Burkitt's lymphomas and Hodgkin's disease

1 reference

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WebLogo: A Sequence Logo Generator

1 reference

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14 September 2017

Epstein-Barr virus and cancer

1 reference

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14 September 2017

Epstein-Barr virus provides a survival factor to Burkitt's lymphomas

1 reference

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14 September 2017

EBNA-1, a bifunctional transcriptional activator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

The spacing between adjacent binding sites in the family of repeats affects the functions of Epstein-Barr nuclear antigen 1 in transcription activation and stable plasmid maintenance

1 reference

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14 September 2017

Complete nucleotide sequence of the rhesus lymphocryptovirus: genetic validation for an Epstein-Barr virus animal model

1 reference

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14 September 2017

Amino acid substitution analyses of the DNA contact region, two amphipathic alpha-helices and a recognition-helix-like helix outside the dimeric beta-barrel of Epstein-Barr virus nuclear antigen 1.

1 reference

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14 September 2017

Replication from oriP of Epstein-Barr virus requires exact spacing of two bound dimers of EBNA1 which bend DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

Promoter-proximal regulatory elements involved in oriP-EBNA1-independent and -dependent activation of the Epstein-Barr virus C promoter in B-lymphoid cell lines

1 reference

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14 September 2017

The linking regions of EBNA1 are essential for its support of replication and transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

Mechanisms that regulate Epstein-Barr virus EBNA-1 gene transcription during restricted latency are conserved among lymphocryptoviruses of Old World primates.

1 reference

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14 September 2017

Up to 100-fold increase of apparent gene expression in the presence of Epstein-Barr virus oriP sequences and EBNA1: implications of the nuclear import of plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

Rep*: a viral element that can partially replace the origin of plasmid DNA synthesis of Epstein-Barr virus.

1 reference

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14 September 2017

Combining evidence using p-values: application to sequence homology searches

1 reference

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

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14 September 2017

Epstein-Barr virus-associated Hodgkin's disease: epidemiologic characteristics in international data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

oriP is essential for EBNA gene promoter activity in Epstein-Barr virus-immortalized lymphoblastoid cell lines.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein, EBNA1, bound to DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

An EBNA-1-dependent enhancer acts from a distance of 10 kilobase pairs to increase expression of the Epstein-Barr virus LMP gene

1 reference

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Fitting a mixture model by expectation maximization to discover motifs in biopolymers

1 reference

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14 September 2017

Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA 1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

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Gamma ray-induced loss of expression of HLA and glyoxalase I alleles in lymphoblastoid cells

1 reference

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A cis-acting element from the Epstein-Barr viral genome that permits stable replication of recombinant plasmids in latently infected cells

1 reference

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DNA sequence and expression of the B95-8 Epstein-Barr virus genome.

1 reference

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14 September 2017

trans activation of an Epstein-Barr viral transcriptional enhancer by the Epstein-Barr viral nuclear antigen 1.

1 reference

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14 September 2017

Herpesvirus papio contains a plasmid origin of replication that acts in cis interspecies with an Epstein-Barr virus trans-acting function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

Multiple EBNA1-binding sites are required to form an EBNA1-dependent enhancer and to activate a minimal replicative origin within oriP of Epstein-Barr virus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

A promoter of Epstein-Barr virus that can function during latent infection can be transactivated by EBNA-1, a viral protein required for viral DNA replication during latent infection.

1 reference

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14 September 2017

Sequence logos: a new way to display consensus sequences

1 reference

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Plasmid origin of replication of herpesvirus papio: DNA sequence and enhancer function.

1 reference

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14 September 2017

Definition of the sequence requirements for binding of the EBNA-1 protein to its palindromic target sites in Epstein-Barr virus DNA

1 reference

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1 reference

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The Epstein-Barr virus nuclear protein 1 promoter active in type I latency is autoregulated

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

14 September 2017

EBNA1 can link the enhancer element to the initiator element of the Epstein-Barr virus plasmid origin of DNA replication

1 reference

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1 reference

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14 September 2017

Epstein-Barr virus-encoded EBNA1 regulates cellular gene transcription and modulates the STAT1 and TGFbeta signaling pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2655553

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Mapping genetic elements of Epstein-Barr virus that facilitate extrachromosomal persistence of Epstein-Barr virus-derived plasmids in human cells

1 reference

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Relationship between the Epstein-Barr virus and undifferentiated nasopharyngeal carcinoma: Correlated nucleic acid hybridization and histopathological examination

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Establishment and characterization of an Epstein-Barr virus (EBC)-negative lymphoblastoid B cell line (BJA-B) from an exceptional, EBV-genome-negative African Burkitt's lymphoma

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A STUDY OF MALIGNANT TUMOURS IN NIGERIA BY SHORT-TERM TISSUE CULTURE

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29 September 2017

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29 September 2017

Comparison of the EBNA1 proteins of Epstein-Barr virus and herpesvirus papio in sequence and function

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29 September 2017

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1 reference

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Autorepression of Epstein-Barr virus nuclear antigen 1 expression by inhibition of pre-mRNA processing

1 reference

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3 September 2018

Essential elements of a licensed, mammalian plasmid origin of DNA synthesis.

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Epstein-Barr virus-associated gastric carcinomas: relation to H. pylori infection and genetic alterations

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3 September 2018

Two domains of the epstein-barr virus origin DNA-binding protein, EBNA1, orchestrate sequence-specific DNA binding

1 reference

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3 September 2018

Electroporation: parameters affecting transfer of DNA into mammalian cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/19129441

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel hypotheses for the roles of EBNA-1 and BHRF1 in EBV-related cancers

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JVI.01974-08

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

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