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Guided by RNAs: X-inactivation as a model for lncRNA function.
scientific article published on 28 June 2013
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scholarly article
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Europe PubMed Central
PMC publication ID
3771680
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23816838%20AND%20SRC:MED&resulttype=core&format=json
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4 March 2020
title
Guided by RNAs: X-inactivation as a model for lncRNA function
(English)
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Europe PubMed Central
PMC publication ID
3771680
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23816838%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
main subject
sex chromatin
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stated in
Gene Ontology release 2020-05-02
Gene Ontology ID
GO:0098580
author
John E Froberg
series ordinal
1
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Europe PubMed Central
PMC publication ID
3771680
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23816838%20AND%20SRC:MED&resulttype=core&format=json
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4 March 2020
Jeannie T. Lee
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3
object named as
Jeannie T Lee
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Europe PubMed Central
PMC publication ID
3771680
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4 March 2020
author name string
Lin Yang
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2
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Europe PubMed Central
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3771680
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4 March 2020
language of work or name
English
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publication date
28 June 2013
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3771680
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4 March 2020
published in
Journal of Molecular Biology
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PMC publication ID
3771680
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retrieved
4 March 2020
volume
425
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Europe PubMed Central
PMC publication ID
3771680
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4 March 2020
issue
19
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Europe PubMed Central
PMC publication ID
3771680
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4 March 2020
page(s)
3698-3706
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4 March 2020
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
6 September 2017
The matrix protein hnRNP U is required for chromosomal localization of Xist RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
Perinucleolar targeting of the inactive X during S phase: evidence for a role in the maintenance of silencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
BRCA1 does not paint the inactive X to localize XIST RNA but may contribute to broad changes in cancer that impact XIST and Xi heterochromatin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
Global analysis of chromosome X gene expression in primary cultures of normal ovarian surface epithelial cells and epithelial ovarian cancer cell lines
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
A transient heterochromatic state in Xist preempts X inactivation choice without RNA stabilization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
Transient homologous chromosome pairing marks the onset of X inactivation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
Regulation of X-chromosome counting by Tsix and Xite sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
Loss of the inactive X chromosome and replication of the active X in BRCA1-defective and wild-type breast cancer cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
Characterization of loss-of-inactive X in Klinefelter syndrome and female-derived cancer cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
Hierarchical recruitment of polycomb group silencing complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
14 September 2017
Mitotically stable association of polycomb group proteins eed and enx1 with the inactive x chromosome in trophoblast stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
28 September 2017
The Drosophila Polycomb group gene pleiohomeotic encodes a DNA binding protein with homology to the transcription factor YY1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
27 June 2018
De novo truncating mutations in E6-AP ubiquitin-protein ligase gene (UBE3A) in Angelman syndrome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
27 June 2018
Characterization of a murine gene expressed from the inactive X chromosome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
27 June 2018
Chromatin-associated RNA content of heterochromatin and euchromatin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
27 June 2018
Crucial role of antisense transcription across the Xist promoter in Tsix-mediated Xist chromatin modification.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Evidence that homologous X-chromosome pairing requires transcription and Ctcf protein.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Symmetry-breaking model for X-chromosome inactivation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Further evidence for BRCA1 communication with the inactive X chromosome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Tsix defective in splicing is competent to establish Xist silencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Transient colocalization of X-inactivation centres accompanies the initiation of X inactivation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Tsix silences Xist through modification of chromatin structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Tsix transcription- versus RNA-based mechanisms in Xist repression and epigenetic choice.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Establishment of histone h3 methylation on the inactive X chromosome requires transient recruitment of Eed-Enx1 polycomb group complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Disruption of imprinted X inactivation by parent-of-origin effects at Tsix.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Targeted mutagenesis of Tsix leads to nonrandom X inactivation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3771680
retrieved
3 September 2018
Xist-deficient mice are defective in dosage compensation but not spermatogenesis
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23816838
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Airn transcriptional overlap, but not its lncRNA products, induces imprinted Igf2r silencing
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23816838
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Imprinted X inactivation maintained by a mouse Polycomb group gene
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23816838
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.JMB.2013.06.031
1 reference
stated in
Europe PubMed Central
PMC publication ID
3771680
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23816838%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
PMC publication ID
3771680
1 reference
stated in
Europe PubMed Central
PMC publication ID
3771680
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23816838%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
PubMed publication ID
23816838
1 reference
stated in
Europe PubMed Central
PMC publication ID
3771680
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23816838%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 March 2020
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