Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q37202569)
Watch
English
miROrtho: computational survey of microRNA genes.
scientific article published on 15 October 2008
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
title
miROrtho: computational survey of microRNA genes
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
main subject
microRNA
1 reference
based on heuristic
inferred from title
author
Daniel Gerlach
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
Charles E Vejnar
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
author name string
Evgenia V Kriventseva
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
Nazim Rahman
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
Evgeny M Zdobnov
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
language of work or name
English
0 references
publication date
15 October 2008
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
published in
Nucleic Acids Research
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
volume
37
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
issue
Database issue
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
page(s)
D111-7
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
cites work
R-Coffee: a method for multiple alignment of non-coding RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Recent developments in the MAFFT multiple sequence alignment program
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
MicroRNAs and cancer: profile, profile, profile
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
miRBase: tools for microRNA genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
OrthoDB: the hierarchical catalog of eukaryotic orthologs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Computational and transcriptional evidence for microRNAs in the honey bee genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
MicroRNA signatures in human cancers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
microRNAs as oncogenes and tumor suppressors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
ProMiR II: a web server for the probabilistic prediction of clustered, nonclustered, conserved and nonconserved microRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Genomics of microRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Identification of clustered microRNAs using an ab initio prediction method
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
microPrimer: the biogenesis and function of microRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Identification and characterization of small RNAs involved in RNA silencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Identification of hundreds of conserved and nonconserved human microRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Principles of microRNA-target recognition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
ProbCons: Probabilistic consistency-based multiple sequence alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Fast and reliable prediction of noncoding RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Phylogenetic shadowing and computational identification of human microRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Rfam: annotating non-coding RNAs in complete genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
The functions of animal microRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Specificity of microRNA target selection in translational repression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
MicroRNAs: genomics, biogenesis, mechanism, and function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Prediction of mammalian microRNA targets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Identification of Drosophila MicroRNA targets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Computational identification of Drosophila microRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Computational and experimental identification of C. elegans microRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
The microRNAs of Caenorhabditis elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Vertebrate microRNA genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Phylogenetic shadowing of primate sequences to find functional regions of the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
Secondary structure prediction for aligned RNA sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
6 September 2017
De novo SVM classification of precursor microRNAs from genomic pseudo hairpins using global and intrinsic folding measures.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
3 September 2018
Reliable prediction of Drosha processing sites improves microRNA gene prediction.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
3 September 2018
RNAshapes: an integrated RNA analysis package based on abstract shapes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
3 September 2018
Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
3 September 2018
Prediction of locally stable RNA secondary structures for genome-wide surveys.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686488
retrieved
3 September 2018
Evidence that miRNAs are different from other RNAs
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18927110
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKN707
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
DBLP publication ID
journals/nar/GerlachKRVZ09
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
2686488
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
PubMed ID
18927110
1 reference
stated in
Europe PubMed Central
PMCID
2686488
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18927110%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 December 2019
ResearchGate publication ID
23388682
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit
