(Q37263713)

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A rapid coarse residue-based computational method for x-ray solution scattering characterization of protein folds and multiple conformational states of large protein complexes.

scientific article published on June 2009

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486669%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

A rapid coarse residue-based computational method for x-ray solution scattering characterization of protein folds and multiple conformational states of large protein complexes (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486669%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

protein folding

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computational biology

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29 January 2020

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Sanghyun Park

2

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29 January 2020

Lee Makowski

3

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29 January 2020

Benoît Roux

4

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29 January 2020

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1 June 2009

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29 January 2020

Biophysical Journal

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29 January 2020

96

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29 January 2020

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29 January 2020

4449-4463

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486669%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

Integration of small-angle X-ray scattering data into structural modeling of proteins and their assemblies

1 reference

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1 reference

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Src kinase conformational activation: thermodynamics, pathways, and mechanisms

1 reference

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Absence of equilibrium cluster phase in concentrated lysozyme solutions

1 reference

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1 reference

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X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in solution

1 reference

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Molecular crowding inhibits intramolecular breathing motions in proteins.

1 reference

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1 reference

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Small-angle X-ray scattering from RNA, proteins, and protein complexes

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Refinement of multidomain protein structures by combination of solution small-angle X-ray scattering and NMR data

1 reference

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Unusual compactness of a polyproline type II structure

1 reference

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Wide-angle X-ray solution scattering as a probe of ligand-induced conformational changes in proteins

1 reference

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Evidence for assembly of prions with left-handed beta-helices into trimers

1 reference

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Small-angle scattering: a view on the properties, structures and structural changes of biological macromolecules in solution

1 reference

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Bcl-XL Mutations Suppress Cellular Sensitivity to Antimycin A

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PISCES: a protein sequence culling server

1 reference

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The catalytic mechanism of galactose mutarotase

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Structural basis for the autoinhibition of c-Abl tyrosine kinase

1 reference

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F-actin-like filaments formed by plasmid segregation protein ParM

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The origins of asymmetry in the folding transition states of protein L and protein G.

1 reference

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6 September 2017

Protein conformations explored by difference high-angle solution X-ray scattering: oxidation state and temperature dependent changes in cytochrome C.

1 reference

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6 September 2017

Is the first hydration shell of lysozyme of higher density than bulk water?

1 reference

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6 September 2017

Protein structure prediction constrained by solution X-ray scattering data and structural homology identification.

1 reference

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6 September 2017

SASSIM: a method for calculating small-angle X-ray and neutron scattering and the associated molecular envelope from explicit-atom models of solvated proteins

1 reference

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6 September 2017

Protein folding mediated by solvation: water expulsion and formation of the hydrophobic core occur after the structural collapse

1 reference

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6 September 2017

Changes in biomolecular conformation seen by small angle X-ray scattering

1 reference

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6 September 2017

Small-angle X-ray scattering of polymers

1 reference

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Protein structure prediction and structural genomics

1 reference

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6 September 2017

Determination of domain structure of proteins from X-ray solution scattering

1 reference

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Functional dynamics of the hydrophobic cleft in the N-domain of calmodulin

1 reference

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1.7 A structure of the stabilized REIv mutant T39K. Application of local NCS restraints

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Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli

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Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

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Ligand-induced conformational change in transferrins: crystal structure of the open form of the N-terminal half-molecule of human transferrin

1 reference

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Two high-resolution crystal structures of the recombinant N-lobe of human transferrin reveal a structural change implicated in iron release

1 reference

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Folding funnels and frustration in off-lattice minimalist protein landscapes

1 reference

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Protein hydration in solution: experimental observation by x-ray and neutron scattering

1 reference

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Solution structure of the N-terminal domain of the delta subunit of the E. coli ATPsynthase

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Small-angle x-ray scattering investigation of the solution structure of troponin C.

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Calmodulin structure refined at 1.7 A resolution

1 reference

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Low-resolution structures of proteins in solution retrieved from X-ray scattering with a genetic algorithm

1 reference

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Left handed beta helix models for mammalian prion fibrils

1 reference

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1 reference

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26 June 2018

Comparison of the crystal and solution structures of calmodulin and troponin C

1 reference

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26 June 2018

Characterization of protein fold by wide-angle X-ray solution scattering

1 reference

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Effective stochastic dynamics on a protein folding energy landscape

1 reference

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Folding of small helical proteins assisted by small-angle X-ray scattering profiles.

1 reference

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1 reference

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1 reference

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Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins

1 reference

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Use of globic scattering factors for protein structures at low resolution.

1 reference

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3 September 2018

Structural hierarchy of several proteins observed by wide-angle solution scattering

1 reference

https://pubmed.ncbi.nlm.nih.gov/19486669

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular modeling of the core of Abeta amyloid fibrils

1 reference

https://pubmed.ncbi.nlm.nih.gov/19486669

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

On 'globbicity' of low-resolution protein structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/19486669

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Equilibrium cluster formation in concentrated protein solutions and colloids

1 reference

https://pubmed.ncbi.nlm.nih.gov/19486669

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural biology. Dynamic visions of enzymatic reactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/19486669

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.BPJ.2009.03.036

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486669%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486669%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19486669%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

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