(Q37333636)

19 August 2017

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title

Genome-scale analyses of health-promoting bacteria: probiogenomics (English)

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19 August 2017

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5

Todd R Klaenhammer

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19 August 2017

6

Douwe van Sinderen

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19 August 2017

Marcus J Claesson

3

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Francesca Turroni

object named as

Francesca Turroni

4

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Marco Ventura

object named as

Marco Ventura

1

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Paul W O'Toole

object named as

Paul W O'Toole

7

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author name string

Sarah O'Flaherty

2

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PubMed ID

19029955

19 August 2017

language of work or name

English

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publication date

24 November 2008

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19 August 2017

11

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Nature Reviews Microbiology

inferred from page(s)

published in

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19 August 2017

7

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19 August 2017

1

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19 August 2017

61-71

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https://scigraph.springernature.com/pub.10.1038/nrmicro2047

19 August 2017

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Diversity of the human gastrointestinal tract microbiota revisited.

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Ecological and evolutionary forces shaping microbial diversity in the human intestine

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Gut flora in health and disease

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Commensal host-bacterial relationships in the gut

31 March 2020

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The gut microbiota as an environmental factor that regulates fat storage

31 March 2020

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A humanized gnotobiotic mouse model of host-archaeal-bacterial mutualism

31 March 2020

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An obesity-associated gut microbiome with increased capacity for energy harvest

31 March 2020

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Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases

31 March 2020

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The fecal microbiota of irritable bowel syndrome patients differs significantly from that of healthy subjects

31 March 2020

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Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach

31 March 2020

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Towards understanding molecular modes of probiotic action

31 March 2020

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Mechanisms of action of probiotics in intestinal diseases.

31 March 2020

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Probiotic and other functional microbes: from markets to mechanisms

31 March 2020

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Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum

31 March 2020

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The model organism as a system: integrating 'omics' data sets

31 March 2020

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Analysis of bifidobacterial evolution using a multilocus approach

31 March 2020

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Genomics as a means to understand bacterial phylogeny and ecological adaptation: the case of bifidobacteria.

31 March 2020

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The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract

31 March 2020

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Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics

31 March 2020

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Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis

31 March 2020

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Glycan foraging in vivo by an intestine-adapted bacterial symbiont

31 March 2020

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A molecular sensor that allows a gut commensal to control its nutrient foundation in a competitive ecosystem

31 March 2020

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Type I arabinogalactan contains beta-D-Galp-(1-->3)-beta-D-Galp structural elements.

31 March 2020

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Screening for and identification of starch-, amylopectin-, and pullulan-degrading activities in bifidobacterial strains

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

Identification and characterization of a fructose phosphotransferase system in Bifidobacterium breve UCC2003

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

Bifidobacterium carbohydrases-their role in breakdown and synthesis of (potential) prebiotics

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

Lactobacillus plantarum gene clusters encoding putative cell-surface protein complexes for carbohydrate utilization are conserved in specific gram-positive bacteria

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

How host-microbial interactions shape the nutrient environment of the mammalian intestine

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

Mucin degradation in human colon ecosystems. Isolation and properties of fecal strains that degrade ABH blood group antigens and oligosaccharides from mucin glycoproteins

31 March 2020

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Mucin degradation by Bifidobacterium strains isolated from the human intestinal microbiota.

31 March 2020

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Insights into the taxonomy, genetics and physiology of bifidobacteria

31 March 2020

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Identification of the gene for beta-fructofuranosidase of Bifidobacterium lactis DSM10140(T) and characterization of the enzyme expressed in Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

Molecular cloning and characterization of Bifidobacterium bifidum 1,2-alpha-L-fucosidase (AfcA), a novel inverting glycosidase (glycoside hydrolase family 95)

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

Transcriptional regulation and characterization of a novel beta-fructofuranosidase-encoding gene from Bifidobacterium breve UCC2003.

31 March 2020

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Differential transcriptional response of Bifidobacterium longum to human milk, formula milk, and galactooligosaccharide

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

Human milk provides peptides highly stimulating the growth of bifidobacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

A serpin from the gut bacterium Bifidobacterium longum inhibits eukaryotic elastase-like serine proteases.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Genomic and metabolic studies of the impact of probiotics on a model gut symbiont and host

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Stable coexistence of five bacterial strains as a cellulose-degrading community.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Lessons from the genomes of bifidobacteria

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2047

Bacteria of dental caries in primary and permanent teeth in children and young adults

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Evolutionary genomics of lactic acid bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Multireplicon genome architecture of Lactobacillus salivarius

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

The genomics of lactic acid bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Genome sequence of Lactobacillus helveticus, an organism distinguished by selective gene loss and insertion sequence element expansion

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Identification of Lactobacillus reuteri genes specifically induced in the mouse gastrointestinal tract

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Identification of Lactobacillus plantarum genes that are induced in the gastrointestinal tract of mice

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Differential activities of four Lactobacillus casei promoters during bacterial transit through the gastrointestinal tracts of human-microbiota-associated mice

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Gene expression of commensal Lactobacillus johnsonii strain NCC533 during in vitro growth and in the murine gut.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Identification of genes associated with the long-gut-persistence phenotype of the probiotic Lactobacillus johnsonii strain NCC533 using a combination of genomics and transcriptome analysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Prokaryotes: the unseen majority

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Analysis of the fecal microflora of human subjects consuming a probiotic product containing Lactobacillus rhamnosus DR20.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Use of probiotic Lactobacillus preparation to prevent diarrhoea associated with antibiotics: randomised double blind placebo controlled trial

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Probiotics and gastrointestinal diseases

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Inhibition of vaginal lactobacilli by a bacteriocin-like inhibitor produced by Enterococcus faecium 62-6: potential significance for bacterial vaginosis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Bacteriocin production as a mechanism for the antiinfective activity of Lactobacillus salivarius UCC118.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

A five-strain probiotic combination reduces pathogen shedding and alleviates disease signs in pigs challenged with Salmonella enterica Serovar Typhimurium.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Comparative genomics of the lactic acid bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Complete genome sequence of Lactobacillus plantarum WCFS1

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Production and isolation of reuterin, a growth inhibitor produced by Lactobacillus reuteri

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

The complete coenzyme B12 biosynthesis gene cluster of Lactobacillus reuteri CRL1098.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Lactobacillus reuteri DSM 20016 produces cobalamin-dependent diol dehydratase in metabolosomes and metabolizes 1,2-propanediol by disproportionation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Comparative genome analysis of Lactobacillus reuteri and Lactobacillus fermentum reveal a genomic island for reuterin and cobalamin production

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

The complete genomes of Lactobacillus plantarum and Lactobacillus johnsonii reveal extensive differences in chromosome organization and gene content

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Extensive horizontal transfer of core genome genes between two Lactobacillus species found in the gastrointestinal tract

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Genomic features of lactic acid bacteria effecting bioprocessing and health

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Diversity of the genus Lactobacillus revealed by comparative genomics of five species

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Acquired antibiotic resistance in lactic acid bacteria from food

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Horizontal gene transfer in prokaryotes: quantification and classification

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Defining genomic islands and uropathogen-specific genes in uropathogenic Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Biodiversity-based identification and functional characterization of the mannose-specific adhesin of Lactobacillus plantarum.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Enhanced antiinflammatory capacity of a Lactobacillus plantarum mutant synthesizing modified teichoic acids

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

The human microbiome project

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Evolution of mammals and their gut microbes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Getting better with bifidobacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2047

Probiotic modulation of symbiotic gut microbial-host metabolic interactions in a humanized microbiome mouse model

31 March 2020

1 reference

12 December 2020

The serpin superfamily of proteinase inhibitors: structure, function, and regulation

1 reference

12 December 2020

Lactobacillus phylogenomics--towards a reclassification of the genus

1 reference

12 December 2020

Genomic features of lactic acid bacteria effecting bioprocessing and health

1 reference

12 December 2020

Identifiers

DOI

10.1038/NRMICRO2047

1 reference

release_y7epr7czkjehxatiwhpatqtbdu

19 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/y7epr7czkjehxatiwhpatqtbdu

24 November 2022

mapped directly with Wikidata item

PubMed ID

19029955

1 reference

PubMed ID

19029955