(Q37348516)

English

Determination of intrinsic hydrophilicity/hydrophobicity of amino acid side chains in peptides in the absence of nearest-neighbor or conformational effects

scientific article published on January 2006

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scholarly article

1 reference

Europe PubMed Central

19 August 2017

Determination of intrinsic hydrophilicity/hydrophobicity of amino acid side chains in peptides in the absence of nearest-neighbor or conformational effects (English)

1 reference

Europe PubMed Central

19 August 2017

1 reference

based on heuristic

inferred from title

nearest neighbour algorithm

1 reference

based on heuristic

inferred from title

author name string

James M Kovacs

1

1 reference

Europe PubMed Central

19 August 2017

Colin T Mant

2

1 reference

Europe PubMed Central

19 August 2017

Robert S Hodges

3

1 reference

Europe PubMed Central

19 August 2017

publication date

1 January 2006

1 reference

Europe PubMed Central

19 August 2017

1 reference

Europe PubMed Central

19 August 2017

84

1 reference

Europe PubMed Central

19 August 2017

3

1 reference

Europe PubMed Central

19 August 2017

283-297

1 reference

Europe PubMed Central

19 August 2017

Rational design of alpha-helical antimicrobial peptides with enhanced activities and specificity/therapeutic index

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Evaluation of methods for measuring amino acid hydrophobicities and interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Multi-dimensional liquid phase based separations in proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Methods for fractionation, separation and profiling of proteins and peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Determination of stereochemistry stability coefficients of amino acid side-chains in an amphipathic alpha-helix.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

An automated on-line multidimensional HPLC system for protein and peptide mapping with integrated sample preparation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Direct analysis of protein complexes using mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

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The helical hydrophobic moment: a measure of the amphiphilicity of a helix

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

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A simple method for displaying the hydropathic character of a protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Prediction of peptide retention times in high-pressure liquid chromatography on the basis of amino acid composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

A simple experimental model for hydrophobic interactions in proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Secondary structures of proteins and peptides in amphiphilic environments. (A review).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Amphipathic analysis and possible formation of the ion channel in an acetylcholine receptor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Effect of single amino acid replacements on the thermal stability of the NH2-terminal domain of phage lambda repressor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Prediction of protein antigenic determinants from amino acid sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Amino acid side-chain partition energies and distribution of residues in soluble proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Solvation energy in protein folding and binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

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Interior and surface of monomeric proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Hydrophobic stabilization in T4 lysozyme determined directly by multiple substitutions of Ile 3

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Dependence of conformational stability on hydrophobicity of the amino acid residue in a series of variant proteins substituted at a unique position of tryptophan synthase alpha subunit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Prediction of sequential antigenic regions in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Dominant forces in protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

Influence of Water on Protein Structure. An Analysis of the Preferences of Amino Acid Residues for the Inside or Outside and for Specific Conformations in a Protein Molecule

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

9 September 2017

The perchlorate anion is more effective than the trifluoroacetate anion as an ion-pairing reagent for reversed-phase chromatography of peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

26 June 2018

Quantitative comparison of the ability of hydropathy scales to recognize surface beta-strands in proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

26 June 2018

Guidelines for membrane protein engineering derived from de novo designed model peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

26 June 2018

Hydrophobicity regained.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

26 June 2018

A quantitative structure-activity relationship study of the inhibitory action of a series of enkephalin-like peptides in the guinea pig ileum and mouse vas deferens bioassays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

26 June 2018

Structural prediction of membrane-bound proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

26 June 2018

Surface tension of amino acid solutions: A hydrophobicity scale of the amino acid residues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

26 June 2018

Hydrophobicity of amino acid residues in globular proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744689

26 June 2018

The behaviour of peptides on reverse-phase supports during high-pressure liquid chromatography

1 reference

https://api.crossref.org/works/10.1002%2FBIP.20417

21 January 2018

Development of hydrophobicity parameters to analyze proteins which bear post- or cotranslational modifications

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromatographic Hydrophobicity Index by Fast-Gradient RP-HPLC: A High-Throughput Alternative to log P/log D

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Destabilizing effects of replacing a surface lysine of cytochrome c with aromatic amino acids: implications for the denatured state

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reversed-phase liquid chromatography as a tool in the determination of the hydrophilicity/hydrophobicity of amino acid side-chains at a ligand-receptor interface in the presence of different aqueous environments. I. Effect of varying receptor hydrop

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

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based on heuristic

inferred from PubMed ID database lookup

Extension of the fragment method to calculate amino acid zwitterion and side chain partition coefficients

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

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based on heuristic

inferred from PubMed ID database lookup

Effect of peptide chain length on peptide retention behaviour in reversed-phase chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

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inferred from PubMed ID database lookup

Stability of silica-based, endcapped columns with pH 7 and 11 mobile phases for reversed-phase high-performance liquid chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relationship of sidechain hydrophobicity and alpha-helical propensity on the stability of the single-stranded amphipathic alpha-helix

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

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based on heuristic

inferred from PubMed ID database lookup

Reversed-phase chromatography of synthetic amphipathic α-helical peptides as a model for ligand/receptor interactions Effect of changing hydrophobic environment on the relative hydrophilicity/hydrophobicity of amino acid side-chains

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Affinities of amino acid side chains for solvent water

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

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based on heuristic

inferred from PubMed ID database lookup

Protein mapping by two-dimensional high performance liquid chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

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inferred from PubMed ID database lookup

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1 reference

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based on heuristic

inferred from PubMed ID database lookup

On the hydrophobic nature of signal sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

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based on heuristic

inferred from PubMed ID database lookup

The isolation of peptides by high-performance liquid chromatography using predicted elution positions

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

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based on heuristic

inferred from PubMed ID database lookup

Effect of the alpha-amino group on peptide retention behaviour in reversed-phase chromatography. Determination of the pK(a) values of the alpha-amino group of 19 different N-terminal amino acid residues

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new scale for side-chain contribution to protein stability based on the empirical stability analysis of mutant proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reversed-phase liquid chromatography as a tool in the determination of the hydrophilicity/hydrophobicity of amino acid side-chains at a ligand-receptor interface in the presence of different aqueous environments. II. Effect of varying peptide ligand

1 reference

https://pubmed.ncbi.nlm.nih.gov/16315143

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/BIP.20417

1 reference

Europe PubMed Central

19 August 2017

release_4ggsp7665bfq7hjeiocnm5wjta

1 reference

https://api.fatcat.wiki/v0/release/4ggsp7665bfq7hjeiocnm5wjta

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

19 August 2017

1 reference

Europe PubMed Central

19 August 2017

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