(Q37373110)

20 August 2017

The effect of branch lengths on phylogeny: an empirical study using highly conserved orthologs from mammalian genomes (English)

1 reference

20 August 2017

1 reference

1

Austin L Hughes

1 reference

20 August 2017

Robert Friedman

2

1 reference

20 August 2017

18 May 2007

1 reference

Molecular Phylogenetics and Evolution

20 August 2017

1 reference

20 August 2017

45

1 reference

20 August 2017

1

1 reference

20 August 2017

81-88

1 reference

A phylogenomic study of human, dog, and mouse

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Evolutionary sequence analysis of complete eukaryote genomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Comparative analysis of protein coding sequences from human, mouse and the domesticated pig

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Should we be worried about long-branch attraction in real data sets? Investigations using metazoan 18S rDNA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Reanalysis of Murphy et al.'s data gives various mammalian phylogenies and suggests overcredibility of Bayesian trees

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Taxon sampling, bioinformatics, and phylogenomics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Increased taxon sampling is advantageous for phylogenetic inference

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Increased taxon sampling greatly reduces phylogenetic error

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

More taxa or more characters revisited: combining data from nuclear protein-encoding genes for phylogenetic analyses of Noctuoidea (Insecta: Lepidoptera).

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Sensitivity of phylogeny estimation to taxonomic sampling

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Resolution of the early placental mammal radiation using Bayesian phylogenetics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Incomplete taxon sampling is not a problem for phylogenetic inference

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Molecular phylogeny of Rodentia, Lagomorpha, Primates, Artiodactyla, and Carnivora and molecular clocks

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

The pattern of mammalian evolution and the relative rate of molecular evolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

The rapid generation of mutation data matrices from protein sequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Higher rates of amino acid substitution in rodents than in humans

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Revisiting the Glires concept--phylogenetic analysis of nuclear sequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Is sparse taxon sampling a problem for phylogenetic inference?

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Phylogenetic analysis using parsimony and likelihood methods

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Rate asymmetry after genome duplication causes substantial long-branch attraction artifacts in the phylogeny of Saccharomyces species

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

The systematic component of phylogenetic error as a function of taxonomic sampling under parsimony

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

The closest BLAST hit is often not the nearest neighbor.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2756227

Confidence Limits on Phylogenies: an Approach using the Bootstrap

2 September 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.04.022

Taxonomic sampling, phylogenetic accuracy, and investigator bias

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.04.022

Gene family content-based phylogeny of prokaryotes: the effect of criteria for inferring homology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.04.022

Biases in Maximum Likelihood and Parsimony: A Simulation Approach to a 10-Taxon Case

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.04.022

Taxon sampling and the accuracy of large phylogenies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2007.04.022

10.1016/J.YMPEV.2007.04.022

7 January 2021

Identifiers

DOI

1 reference

release_r524e3bppfcmvmlxcyhkz7kxmu

20 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/r524e3bppfcmvmlxcyhkz7kxmu

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

2756227

1 reference

PMC publication ID

2756227

20 August 2017

PubMed publication ID

17574446

1 reference

PMC publication ID

2756227