(Q37380194)

English

Epigenome-wide DNA methylation landscape of melanoma progression to brain metastasis reveals aberrations on homeobox D cluster associated with prognosis.

scientific article published on 06 September 2013

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scholarly article

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Europe PubMed Central

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20 February 2020

Epigenome-wide DNA methylation landscape of melanoma progression to brain metastasis reveals aberrations on homeobox D cluster associated with prognosis (English)

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20 February 2020

DNA methylation

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brain metastasis

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based on heuristic

inferred from title

Rajmohan Murali

13

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20 February 2020

Richard Scolyer

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20 February 2020

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20 February 2020

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20 February 2020

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Donald L Morton

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20 February 2020

Brindha Shivalingam

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Brindha Shivalingam

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20 February 2020

Michael Buckland

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Michael E Buckland

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20 February 2020

author name string

Diego M Marzese

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20 February 2020

Jamie L Huynh

3

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20 February 2020

Sharon K Huang

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20 February 2020

Hajime Hirose

5

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20 February 2020

Kelly K Chong

6

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20 February 2020

Eiji Kiyohara

7

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20 February 2020

Jinhua Wang

8

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20 February 2020

Neal P Kawas

9

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20 February 2020

Nicholas C Donovan

10

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20 February 2020

James S Wilmott

12

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20 February 2020

John F Thompson

16

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20 February 2020

Daniel F Kelly

18

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20 February 2020

publication date

6 September 2013

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20 February 2020

Human Molecular Genetics

1 reference

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20 February 2020

23

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20 February 2020

1

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20 February 2020

226-238

1 reference

Europe PubMed Central

PMC publication ID

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20 February 2020

Passive and active DNA methylation and the interplay with genetic variation in gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

The human placenta methylome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

HOXA1 drives melanoma tumor growth and metastasis and elicits an invasion gene expression signature that prognosticates clinical outcome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Functional DNA demethylation is accompanied by chromatin accessibility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Cancer statistics, 2013

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Dynamic DNA methylation across diverse human cell lines and tissues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Global DNA hypomethylation in cancer: review of validated methods and clinical significance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Whole genome methylation profiles as independent markers of survival in stage IIIC melanoma patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Epigenetic reprogramming and post-transcriptional regulation during the epithelial-mesenchymal transition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Functions of DNA methylation: islands, start sites, gene bodies and beyond

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Increased HOX C13 expression in metastatic melanoma progression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Tumor cell plasticity and angiogenesis in human melanomas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

AIM1 and LINE-1 epigenetic aberrations in tumor and serum relate to melanoma progression and disease outcome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Tumor metastasis: molecular insights and evolving paradigms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Large-scale methylation domains mark a functional subset of neuronally expressed genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Genome-scale analysis of aberrant DNA methylation in colorectal cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Cell type-specific DNA methylation at intragenic CpG islands in the immune system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Functional analysis of HOXD9 in human gliomas and glioma cancer stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

LINE-1 hypomethylation during primary colon cancer progression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

A user's guide to the encyclopedia of DNA elements (ENCODE)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Surgical management of melanoma brain metastases in patients treated with immunotherapy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Hallmarks of Cancer: The Next Generation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

The NIH Roadmap Epigenomics Mapping Consortium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Long noncoding RNAs with enhancer-like function in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

The DNA methylome of glioblastoma multiforme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Human DNA methylomes at base resolution show widespread epigenomic differences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Genome-wide screen of promoter methylation identifies novel markers in melanoma.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Finding the fifth base: genome-wide sequencing of cytosine methylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

CpG island methylator phenotype predicts progression of malignant melanoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Epigenetics in cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

The epigenomics of cancer

1 reference

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6 September 2017

TM4 microarray software suite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Estrogen receptor-alpha methylation predicts melanoma progression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Association of circulating tumor cells with serum tumor-related methylated DNA in peripheral blood of melanoma patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Early aging-associated phenotypes in Bub3/Rae1 haploinsufficient mice

1 reference

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6 September 2017

Mammalian polycomb-mediated repression of Hox genes requires the essential spliceosomal protein Sf3b1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Synthesis of universal unmethylated control DNA by nested whole genome amplification with phi29 DNA polymerase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Brain metastases in melanoma: roles of neurotrophins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

Senescence, aging, and malignant transformation mediated by p53 in mice lacking the Brca1 full-length isoform

1 reference

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6 September 2017

Tandem repeats finder: a program to analyze DNA sequences

1 reference

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6 September 2017

Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

6 September 2017

MicroRNA miR-196a is a central regulator of HOX-B7 and BMP4 expression in malignant melanoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3857956

14 September 2017

Prognostic factors in 1,521 melanoma patients with distant metastases.

1 reference

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14 September 2017

Heterogeneous epigenetic regulation of TIMP3 in prostate cancer.

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28 September 2017

Regulated noise in the epigenetic landscape of development and disease

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26 June 2018

Increased methylation variation in epigenetic domains across cancer types

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26 June 2018

Genome-wide promoter methylation analysis identifies epigenetic silencing of MAPK13 in primary cutaneous melanoma.

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2 September 2018

High density DNA methylation array with single CpG site resolution

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2 September 2018

Molecular mechanisms of metastasis.

1 reference

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2 September 2018

A regulatory 'landscape effect' over the HoxD cluster.

1 reference

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2 September 2018

Altered expressions of HOX genes in human cutaneous malignant melanoma.

1 reference

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2 September 2018

A HOX complex, a repressor element and a 50 bp sequence confer regional specificity to a DPP-responsive enhancer.

1 reference

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2 September 2018

1 reference

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2 October 2018

Hypomethylation of LINE-1 in primary tumor has poor prognosis in young breast cancer patients: a retrospective cohort study

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromatin compaction at Hox loci: a polycomb tale beyond histone tails

1 reference

https://pubmed.ncbi.nlm.nih.gov/24014427

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/HMG/DDT420

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24014427%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24014427%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24014427%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

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