(Q37396568)

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Biologically relevant oxidants and terminology, classification and nomenclature of oxidatively generated damage to nucleobases and 2-deoxyribose in nucleic acids.

scientific article published on 22 February 2012

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20 January 2020

Biologically relevant oxidants and terminology, classification and nomenclature of oxidatively generated damage to nucleobases and 2-deoxyribose in nucleic acids (English)

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Ryszard Oliński

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Karol Bialkowski

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Mark D Evans

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Marc M Greenberg

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Marc M Greenberg

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J Richard Wagner

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Peter Møller

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Free Radical Research

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Sequence-dependent variation in the reactivity of 8-Oxo-7,8-dihydro-2'-deoxyguanosine toward oxidation

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Reactive nitrogen species in the chemical biology of inflammation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Evidence for Ozone Formation in Human Atherosclerotic Arteries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Radical-radical reactions of superoxide: a potential route to toxicity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Oxy radicals, lipid peroxidation and DNA damage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

The exocyclic 1,N2-deoxyguanosine pyrimidopurinone M1G is a chemically stable DNA adduct when placed opposite a two-base deletion in the (CpG)3 frameshift hotspot of the Salmonella typhimurium hisD3052 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Identification and quantification of 8,5'-cyclo-2'-deoxy-adenosine in DNA by liquid chromatography/ mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Quinone sensitized electron transfer photooxidation of nucleic acids: chemistry of thymine and thymidine radical cations in aqueous solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Apparent hydroxyl radical production by peroxynitrite: implications for endothelial injury from nitric oxide and superoxide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

NMR studies of a DNA containing 8-hydroxydeoxyguanosine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Efficient DNA interstrand crosslinking by 6-thioguanine and UVA radiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Towards a more reliable comet assay: optimising agarose concentration, unwinding time and electrophoresis conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

6 September 2017

Analysis of 7,8-dihydro-8-oxo-2'-deoxyguanosine in cellular DNA during oxidative stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

14 September 2017

Detection of complex DNA damage in gamma-irradiated acute lymphoblastic leukemia Pre-b NALM-6 cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

14 September 2017

DNA damage by bromate: mechanism and consequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

14 September 2017

Establishing the background level of base oxidation in human lymphocyte DNA: results of an interlaboratory validation study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

14 September 2017

Clustered DNA damages induced by x rays in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

28 September 2017

Nitrite-induced deamination and hypochlorite-induced oxidation of DNA in intact human respiratory tract epithelial cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

28 September 2017

DNA damage and mutagenesis by radiomimetic DNA-cleaving agents: bleomycin, neocarzinostatin and other enediynes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

28 September 2017

Endogenous DNA breaks: gammaH2AX and the role of telomeres

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

26 June 2018

Spiroiminodihydantoin is the major product of the 8-oxo-7,8-dihydroguanosine reaction with peroxynitrite in the presence of thiols and guanosine photooxidation by methylene blue.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

26 June 2018

Determination of steady-state levels of oxidative DNA base modifications in mammalian cells by means of repair endonucleases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

26 June 2018

Oxidative damage to DNA: formation, measurement, and biological significance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

26 June 2018

15N nuclear magnetic resonance studies on the tautomerism of 8-hydroxy-2'-deoxyguanosine, 8-hydroxyguanosine, and other C8-substituted guanine nucleosides.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

26 June 2018

8-Hydroxyguanine: a base for discovery.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Quantifying etheno-DNA adducts in human tissues, white blood cells, and urine by ultrasensitive (32)P-postlabeling and immunohistochemistry.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Ability of hypochlorous acid and N-chloramines to chlorinate DNA and its constituents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Radiation-induced formation of purine 5',8-cyclonucleosides in isolated and cellular DNA: high stereospecificity and modulating effect of oxygen.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Recommendations for standardized description of and nomenclature concerning oxidatively damaged nucleobases in DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Oxidation reactions of cytosine DNA components by hydroxyl radical and one-electron oxidants in aerated aqueous solutions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Selective one-electron oxidation of duplex DNA oligomers: reaction at thymines.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

In vivo formation and in vitro replication of a guanine-thymine intrastrand cross-link lesion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Determination of redox potentials for the Watson-Crick base pairs, DNA nucleosides, and relevant nucleoside analogues.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

hOGG1 recognizes oxidative damage using the comet assay with greater specificity than FPG or ENDOIII.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Mechanism of DNA damage induced by bromate differs from general types of oxidative stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

First principles calculations of the tautomers and pK(a) values of 8-oxoguanine: implications for mutagenicity and repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Radical oxidation of the adenine moiety of nucleoside and DNA: 2-hydroxy-2'-deoxyadenosine is a minor decomposition product

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Cross-linked thymine-purine base tandem lesions: synthesis, characterization, and measurement in gamma-irradiated isolated DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Synthesis and characterization of oligodeoxynucleotides containing formamidopyrimidine lesions and nonhydrolyzable analogues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

DNA tandem lesions containing 8-oxo-7,8-dihydroguanine and formamido residues arise from intramolecular addition of thymine peroxyl radical to guanine.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Studies on N4-(2-deoxy-D-pentofuranosyl)-4,6-diamino-5-formamidopyrimidine (Fapy.dA) and N6-(2-deoxy-D-pentofuranosyl)-6-diamino-5-formamido-4-hydroxypyrimidine (Fapy.dG).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Chlorination of guanosine and other nucleosides by hypochlorous acid and myeloperoxidase of activated human neutrophils. Catalysis by nicotine and trimethylamine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Temperature-dependent formation of a conjugate between tris(hydroxymethyl)aminomethane buffer and the malondialdehyde-DNA adduct pyrimidopurinone.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

Hydroxylation of the C-8 position of deoxyguanosine by reducing agents in the presence of oxygen.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 September 2018

New insights into the reaction paths of hydroxyl radicals with 2'-deoxyguanosine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3864884

2 October 2018

Association between 8-oxo-7,8-dihydroguanine excretion and risk of lung cancer in a prospective study

1 reference

https://api.crossref.org/works/10.3109%2F10715762.2012.659248

21 January 2018

One-electron oxidation of DNA and inflammation processes

1 reference

https://api.crossref.org/works/10.3109%2F10715762.2012.659248

21 January 2018

Guanine oxidation: one- and two-electron reactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vicinal lesions in X-irradiated DNA?

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Influence of the OGG1 Ser326Cys polymorphism on oxidatively damaged DNA and repair activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of spiroiminodihydantoin as a product of one-electron oxidation of 8-Oxo-7,8-dihydroguanosine

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gamma irradiation of 2'-deoxyadenosine in oxygen-free aqueous solutions: identification and conformational features of formamidopyrimidine nucleoside derivatives

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Monomeric base damage products from adenine, guanine, and thymine induced by exposure of DNA to ultraviolet radiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Application of capillary gas chromatography-mass spectrometry to chemical characterization of radiation-induced base damage of DNA: implications for assessing DNA repair processes

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tautomeric equilibria in 8-oxopurines: implications for mutagenicity

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization and mechanism of formation of tandem lesions in DNA by a nucleobase peroxyl radical

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The use of bacterial repair endonucleases in the comet assay

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR structural studies of the ionizing radiation adduct 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) opposite deoxyadenosine in a DNA duplex. 8-Oxo-7H-dG(syn).dA(anti) alignment at lesion site

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An ab initio molecular orbital study on the characteristics of 8-hydroxyguanine

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of lysine-guanine cross-links upon one-electron oxidation of a guanine-containing oligonucleotide in the presence of a trilysine peptide

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Peroxynitrite and reactive nitrogen species: the contribution of ABB in two decades of research

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and conformational analyses of 8-hydroxy-2'-deoxyguanosine

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hydroxyl free radical adduct of deoxyguanosine: sensitive detection and mechanisms of formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemistry of Glycosylases and Endonucleases Involved in Base-Excision Repair

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Peroxynitrite reaction with carbon dioxide/bicarbonate: kinetics and influence on peroxynitrite-mediated oxidations

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A model of the cell nucleus for DNA damage calculations

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ozone in arteriosclerotic plaques: searching for the "smoking gun"

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The basic chemistry of nitrogen monoxide and peroxynitrite

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The comet assay: a method to measure DNA damage in individual cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/22263561

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.3109/10715762.2012.659248

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22263561%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22263561%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22263561%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

ResearchGate publication ID

0 references

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