(Q37507652)

English

Altered stoichiometry Escherichia coli Cascade complexes with shortened CRISPR RNA spacers are capable of interference and primed adaptation

scientific article published on 13 October 2016

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

20 August 2017

Altered stoichiometry Escherichia coli Cascade complexes with shortened CRISPR RNA spacers are capable of interference and primed adaptation (English)

1 reference

Europe PubMed Central

20 August 2017

0 references

0 references

Escherichia coli

1 reference

based on heuristic

inferred from title

Monika Tokmina-Lukaszewska

4

object named as

Monika Tokmina-Lukaszewska

1 reference

Europe PubMed Central

20 August 2017

author name string

Konstantin Kuznedelov

1

1 reference

Europe PubMed Central

20 August 2017

Vladimir Mekler

2

1 reference

Europe PubMed Central

20 August 2017

Sofia Lemak

3

1 reference

Europe PubMed Central

20 August 2017

Kirill A Datsenko

5

1 reference

Europe PubMed Central

20 August 2017

Ishita Jain

6

1 reference

Europe PubMed Central

20 August 2017

Ekaterina Savitskaya

7

1 reference

Europe PubMed Central

20 August 2017

John Mallon

8

1 reference

Europe PubMed Central

20 August 2017

Sergey Shmakov

9

1 reference

Europe PubMed Central

20 August 2017

Brian Bothner

10

1 reference

Europe PubMed Central

20 August 2017

Scott Bailey

11

1 reference

Europe PubMed Central

20 August 2017

Alexander F Yakunin

12

1 reference

Europe PubMed Central

20 August 2017

Konstantin Severinov

13

1 reference

Europe PubMed Central

20 August 2017

Ekaterina Semenova

14

1 reference

Europe PubMed Central

20 August 2017

language of work or name

0 references

publication date

13 October 2016

1 reference

Europe PubMed Central

20 August 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

20 August 2017

44

1 reference

Europe PubMed Central

20 August 2017

22

1 reference

Europe PubMed Central

20 August 2017

10849-10861

1 reference

Europe PubMed Central

20 August 2017

copyright license

Creative Commons Attribution-NonCommercial 4.0 International

15 December 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

describes a project that uses

1 reference

10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=5159557

Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Highly efficient primed spacer acquisition from targets destroyed by the Escherichia coli type I-E CRISPR-Cas interfering complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

The CRISPR RNA-guided surveillance complex in Escherichia coli accommodates extended RNA spacers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Kinetics of the CRISPR-Cas9 effector complex assembly and the role of 3'-terminal segment of guide RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

CRISPR interference and priming varies with individual spacer sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Foreign DNA capture during CRISPR-Cas adaptive immunity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

An updated evolutionary classification of CRISPR-Cas systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

The Cas6e ribonuclease is not required for interference and adaptation by the E. coli type I-E CRISPR-Cas system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Biogenesis pathways of RNA guides in archaeal and bacterial CRISPR-Cas adaptive immunity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Annotation and Classification of CRISPR-Cas Systems.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

CRISPR RNA binding and DNA target recognition by purified Cascade complexes from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Pervasive generation of oppositely oriented spacers during CRISPR adaptation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Type I-E CRISPR-cas systems discriminate target from non-target DNA through base pairing-independent PAM recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

A ruler protein in a complex for antiviral defense determines the length of small interfering CRISPR RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

In vitro reconstitution of an Escherichia coli RNA-guided immune system reveals unidirectional, ATP-dependent degradation of DNA target

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

CRISPR interference directs strand specific spacer acquisition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral Immunity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Structures of the RNA-guided surveillance complex from a bacterial immune system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Binding and cleavage of CRISPR RNA by Cas6

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Sequence- and Structure-Specific RNA Processing by a CRISPR Endonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

Small CRISPR RNAs guide antiviral defense in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

23 August 2017

The Influence of Copy-Number of Targeted Extrachromosomal Genetic Elements on the Outcome of CRISPR-Cas Defense

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

14 September 2017

Cas3-Derived Target DNA Degradation Fragments Fuel Primed CRISPR Adaptation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

14 September 2017

Modulating the Cascade architecture of a minimal Type I-F CRISPR-Cas system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

14 September 2017

Structure of the CRISPR interference complex CSM reveals key similarities with cascade

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5159557

26 June 2018

Identifiers

10.1093/NAR/GKW914

1 reference

Europe PubMed Central

20 August 2017

1 reference

Europe PubMed Central

20 August 2017

1 reference

Europe PubMed Central

20 August 2017

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q37507652&oldid=2098941823"