(Q37550198)

21 August 2017

Genomic and transcriptomic plasticity in treatment-naive ovarian cancer (English)

1 reference

21 August 2017

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1 reference

Marlous Hoogstraat

1

0 references

Isaac J Nijman

object named as

Isaac J Nijman

11

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author name string

Mirjam S de Pagter

2

1 reference

21 August 2017

Geert A Cirkel

3

1 reference

21 August 2017

Markus J van Roosmalen

4

1 reference

21 August 2017

Timothy T Harkins

5

1 reference

21 August 2017

Karen Duran

6

1 reference

21 August 2017

Jennifer Kreeftmeijer

7

1 reference

21 August 2017

Ivo Renkens

8

1 reference

21 August 2017

Petronella O Witteveen

9

1 reference

21 August 2017

Clarence C Lee

10

1 reference

21 August 2017

Tanisha Guy

12

1 reference

21 August 2017

Ruben van 't Slot

13

1 reference

21 August 2017

Trudy N Jonges

14

1 reference

21 August 2017

Martijn P Lolkema

15

1 reference

21 August 2017

Marco J Koudijs

16

1 reference

21 August 2017

Ronald P Zweemer

17

1 reference

21 August 2017

Emile E Voest

18

1 reference

21 August 2017

Edwin Cuppen

19

1 reference

21 August 2017

Wigard P Kloosterman

20

1 reference

21 August 2017

12 November 2013

1 reference

21 August 2017

1 reference

21 August 2017

24

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21 August 2017

2

1 reference

21 August 2017

200-211

1 reference

describes a project that uses

21 August 2017

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

cites work

Distinct evolutionary trajectories of primary high-grade serous ovarian cancers revealed through spatial mutational profiling

1 reference

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Targeting signaling pathways in epithelial ovarian cancer

23 August 2017

1 reference

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The importance of the PI3K/AKT/MTOR pathway in the progression of ovarian cancer

23 August 2017

1 reference

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Expression of the glioma-associated oncogene homolog 1 (gli1) in advanced serous ovarian cancer is associated with unfavorable overall survival

23 August 2017

1 reference

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Deciphering signatures of mutational processes operative in human cancer

23 August 2017

1 reference

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Prognostically relevant gene signatures of high-grade serous ovarian carcinoma

23 August 2017

1 reference

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Evolution of the cancer genome

23 August 2017

1 reference

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Mutational processes molding the genomes of 21 breast cancers

23 August 2017

1 reference

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Strelka: accurate somatic small-variant calling from sequenced tumor-normal sample pairs

23 August 2017

1 reference

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Tandem duplication of chromosomal segments is common in ovarian and breast cancer genomes

23 August 2017

1 reference

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Identification of somatic mutations in non-small cell lung carcinomas using whole-exome sequencing

23 August 2017

1 reference

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Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing

23 August 2017

1 reference

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Integrin inhibitors as a therapeutic agent for ovarian cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Copy number variation analysis of matched ovarian primary tumors and peritoneal metastasis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Functionally recurrent rearrangements of the MAST kinase and Notch gene families in breast cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Multiplexed array-based and in-solution genomic enrichment for flexible and cost-effective targeted next-generation sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Chromothripsis is a common mechanism driving genomic rearrangements in primary and metastatic colorectal cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Rethinking ovarian cancer: recommendations for improving outcomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Integrated genomic analyses of ovarian carcinoma

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Distant metastasis occurs late during the genetic evolution of pancreatic cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

The patterns and dynamics of genomic instability in metastatic pancreatic cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Allele-specific copy number analysis of tumors

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Making the best of PARP inhibitors in ovarian cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

BRCA1 and BRCA2: breast/ovarian cancer susceptibility gene products and participants in DNA double-strand break repair

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

International network of cancer genome projects

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

BEDTools: a flexible suite of utilities for comparing genomic features

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Complex landscapes of somatic rearrangement in human breast cancer genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

COSMIC (the Catalogue of Somatic Mutations in Cancer): a resource to investigate acquired mutations in human cancer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Computational methods for discovering structural variation with next-generation sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Fast and accurate short read alignment with Burrows-Wheeler transform

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Cancer-related inflammation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Anatomic site-related expression of cancer-associated molecules in ovarian carcinoma

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

A census of human cancer genes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Cytoscape: a software environment for integrated models of biomolecular interaction networks

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Carcinosarcoma of the ovary.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

23 August 2017

The Hallmarks of Cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Molecular genetic evidence for unifocal origin of advanced epithelial ovarian cancer and for minor clonal divergence

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

New strategies in the treatment of ovarian cancer: current clinical perspectives and future potential

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Prevailing importance of the hedgehog signaling pathway and the potential for treatment advancement in sarcoma.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Primary colorectal cancers and their subsequent hepatic metastases are genetically different: implications for selection of patients for targeted treatment

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Exploring the genomes of cancer cells: progress and promise

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Optimal treatment for relapsing ovarian cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

A census of amplified and overexpressed human cancer genes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Carcinosarcoma of the ovary compared to papillary serous ovarian carcinoma: a SEER analysis

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Parallel progression of primary tumours and metastases

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Oestrogen receptor 1 mRNA is a prognostic factor in ovarian cancer patients treated with neo-adjuvant chemotherapy: determination by array and kinetic PCR in fresh tissue biopsies

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Genetic intra-tumour heterogeneity in epithelial ovarian cancer and its implications for molecular diagnosis of tumours

2 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3912411

Chromothripsis as a mechanism driving complex de novo structural rearrangements in the germline†

3 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24221193

12 December 2020

inferred from PubMed ID database lookup

Collision tumor: serous cystadenocarcinoma and dermoid cyst in the same ovary

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24221193

12 December 2020

inferred from PubMed ID database lookup

Evidence emerges for early metastasis and parallel evolution of primary and metastatic tumors

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24221193

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1101/GR.161026.113

1 reference

21 August 2017

1 reference

21 August 2017

PubMed publication ID

24221193

1 reference