(Q37586259)

English

Deep transcriptome sequencing of wild halophyte rice, Porteresia coarctata, provides novel insights into the salinity and submergence tolerance factors

scientific article published on 08 October 2013

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

Deep transcriptome sequencing of wild halophyte rice, Porteresia coarctata, provides novel insights into the salinity and submergence tolerance factors (English)

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

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1 reference

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inferred from title

Porteresia coarctata

object named as

Porteresia coarctata

1 reference

based on heuristic

inferred from title

author name string

Rohini Garg

1

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

Mohit Verma

2

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

Shashank Agrawal

3

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

Rama Shankar

4

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

Manoj Majee

5

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

Mukesh Jain

6

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

publication date

8 October 2013

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

21

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

1

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

69-84

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data

1 reference

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1 reference

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1 reference

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Insights into salt tolerance from the genome of Thellungiella salsuginea

1 reference

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23 August 2017

NGS QC Toolkit: a toolkit for quality control of next generation sequencing data

1 reference

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1 reference

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RNA sequencing: advances, challenges and opportunities

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Massive parallel sequencing of mRNA in identification of unannotated salinity stress-inducible transcripts in rice (Oryza sativa L.).

1 reference

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23 August 2017

Differential expression analysis for sequence count data

1 reference

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23 August 2017

A cellulose synthase-like protein is required for osmotic stress tolerance in Arabidopsis

1 reference

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Abscisic acid: emergence of a core signaling network

1 reference

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The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors

1 reference

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23 August 2017

Applications of new sequencing technologies for transcriptome analysis.

1 reference

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23 August 2017

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1 reference

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23 August 2017

Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice

1 reference

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23 August 2017

Transcriptome map for seedling stage specific salinity stress response indicates a specific set of genes as candidate for saline tolerance in Oryza sativa L.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925395

23 August 2017

Salinity tolerance in halophytes

1 reference

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23 August 2017

Flooding tolerance in halophytes.

1 reference

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23 August 2017

Mechanisms of salinity tolerance

1 reference

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23 August 2017

Mechanisms of high salinity tolerance in plants

1 reference

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23 August 2017

Jasmonates: an update on biosynthesis, signal transduction and action in plant stress response, growth and development

1 reference

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23 August 2017

Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925395

23 August 2017

A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925395

23 August 2017

Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925395

23 August 2017

Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925395

23 August 2017

How plants cope with complete submergence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925395

23 August 2017

Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925395

23 August 2017

Sugar signalling and gene expression in relation to carbohydrate metabolism under abiotic stresses in plants

1 reference

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Gramene: a bird's eye view of cereal genomes

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23 August 2017

Salinity stress adaptation competence in the extremophile Thellungiella halophila in comparison with its relative Arabidopsis thaliana.

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23 August 2017

BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

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23 August 2017

Before and beyond ABA: upstream sensing and internal signals that determine ABA accumulation and response under abiotic stress

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3925395

23 August 2017

Regulation of abscisic acid biosynthesis.

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23 August 2017

A functional genomics approach toward the understanding of secondary metabolism in plant cells

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23 August 2017

Trehalose accumulation in rice plants confers high tolerance levels to different abiotic stresses

1 reference

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23 August 2017

The submergence tolerance gene SUB1A delays leaf senescence under prolonged darkness through hormonal regulation in rice

1 reference

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6 September 2017

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6 September 2017

Next-generation sequencing technologies for gene expression profiling in plants

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6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray

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6 September 2017

Salinity tolerance, Na+ exclusion and allele mining of HKT1;5 in Oryza sativa and O. glaberrima: many sources, many genes, one mechanism?

1 reference

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28 September 2017

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28 September 2017

Genome structures and halophyte-specific gene expression of the extremophile Thellungiella parvula in comparison with Thellungiella salsuginea (Thellungiella halophila) and Arabidopsis

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25 June 2018

Salt cress. A halophyte and cryophyte Arabidopsis relative model system and its applicability to molecular genetic analyses of growth and development of extremophiles.

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25 June 2018

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1 September 2018

SUB1A-dependent and -independent mechanisms are involved in the flooding tolerance of wild rice species

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1 September 2018

A novel salt-tolerant L-myo-inositol-1-phosphate synthase from Porteresia coarctata (Roxb.) Tateoka, a halophytic wild rice: molecular cloning, bacterial overexpression, characterization, and functional introgression into tobacco-conferring salt tol

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1 September 2018

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1 September 2018

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2 October 2018

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https://pubmed.ncbi.nlm.nih.gov/24104396

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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https://pubmed.ncbi.nlm.nih.gov/24104396

12 December 2020

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inferred from PubMed ID database lookup

Natural variation of submergence tolerance among Arabidopsis thaliana accessions

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https://pubmed.ncbi.nlm.nih.gov/24104396

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional regulatory networks in response to abiotic stresses in Arabidopsis and grasses

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https://pubmed.ncbi.nlm.nih.gov/24104396

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Root-Specific Transcript Profiling of Contrasting Rice Genotypes in Response to Salinity Stress

1 reference

https://pubmed.ncbi.nlm.nih.gov/24104396

12 December 2020

based on heuristic

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https://pubmed.ncbi.nlm.nih.gov/24104396

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/DNARES/DST042

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

ResearchGate publication ID

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