(Q37631883)

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Tracking the processing of damaged DNA double-strand break ends by ligation-mediated PCR: increased persistence of 3'-phosphoglycolate termini in SCAN1 cells

scientific article published on 25 December 2013

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scholarly article

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21 August 2017

Tracking the processing of damaged DNA double-strand break ends by ligation-mediated PCR: increased persistence of 3'-phosphoglycolate termini in SCAN1 cells (English)

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21 August 2017

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12 June 2020

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Konstantin Akopiants

1

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12 June 2020

Susovan Mohapatra

2

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12 June 2020

Tong Zhou

4

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12 June 2020

Kristoffer Valerie

5

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12 June 2020

Lawrence F Povirk

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25 December 2013

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Nucleic Acids Research

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12 June 2020

42

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12 June 2020

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12 June 2020

3125-3137

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12 June 2020

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4 October 2016

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Processing of damaged DNA ends for double-strand break repair in mammalian cells

1 reference

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Ligand modulation of a dinuclear platinum compound leads to mechanistic differences in cell cycle progression and arrest

1 reference

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Distinct roles of Ape1 protein in the repair of DNA damage induced by ionizing radiation or bleomycin

1 reference

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23 August 2017

TDP2/TTRAP is the major 5'-tyrosyl DNA phosphodiesterase activity in vertebrate cells and is critical for cellular resistance to topoisomerase II-induced DNA damage

1 reference

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23 August 2017

Patching and single-strand ligation in nonhomologous DNA end joining despite persistence of a closely opposed 3'-phosphoglycolate-terminated strand break

1 reference

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23 August 2017

Coordination of DNA-PK activation and nuclease processing of DNA termini in NHEJ.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

Mechanism of action of an imidopiperidine inhibitor of human polynucleotide kinase/phosphatase

1 reference

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23 August 2017

Tyrosyl-DNA phosphodiesterase and the repair of 3'-phosphoglycolate-terminated DNA double-strand breaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

In vitro complementation of Tdp1 deficiency indicates a stabilized enzyme-DNA adduct from tyrosyl but not glycolate lesions as a consequence of the SCAN1 mutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

Repair of ionizing radiation-induced DNA double-strand breaks by non-homologous end-joining

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

ATM signaling facilitates repair of DNA double-strand breaks associated with heterochromatin

1 reference

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23 August 2017

Coordinate 5' and 3' endonucleolytic trimming of terminally blocked blunt DNA double-strand break ends by Artemis nuclease and DNA-dependent protein kinase

1 reference

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23 August 2017

Positional stability of single double-strand breaks in mammalian cells

1 reference

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23 August 2017

Processing of 3'-phosphoglycolate-terminated DNA double strand breaks by Artemis nuclease

1 reference

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23 August 2017

Preclinical evaluation of a potent novel DNA-dependent protein kinase inhibitor NU7441.

1 reference

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23 August 2017

Identification of thymidine-5'-aldehyde at DNA strand breaks induced by neocarzinostatin chromophore

1 reference

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23 August 2017

Human Tdp1 cleaves a broad spectrum of substrates, including phosphoamide linkages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

Deficiency in 3'-phosphoglycolate processing in human cells with a hereditary mutation in tyrosyl-DNA phosphodiesterase (TDP1)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

Identification of a highly potent and selective DNA-dependent protein kinase (DNA-PK) inhibitor (NU7441) by screening of chromenone libraries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

Repetitive sequences that shape the human transcriptome

1 reference

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23 August 2017

Stable down-regulation of human polynucleotide kinase enhances spontaneous mutation frequency and sensitizes cells to genotoxic agents

1 reference

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23 August 2017

Autophosphorylation of the catalytic subunit of the DNA-dependent protein kinase is required for efficient end processing during DNA double-strand break repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

Mutation of TDP1, encoding a topoisomerase I-dependent DNA damage repair enzyme, in spinocerebellar ataxia with axonal neuropathy

1 reference

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23 August 2017

Involvement of human polynucleotide kinase in double-strand break repair by non-homologous end joining

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

Conversion of phosphoglycolate to phosphate termini on 3' overhangs of DNA double strand breaks by the human tyrosyl-DNA phosphodiesterase hTdp1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

The tyrosyl-DNA phosphodiesterase Tdp1 is a member of the phospholipase D superfamily

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

PCR-based approaches to adduct analysis

1 reference

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23 August 2017

3'-phosphodiesterase activity of human apurinic/apyrimidinic endonuclease at DNA double-strand break ends

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

23 August 2017

A survey of the genomic distribution of alpha satellite DNA on all the human chromosomes, and derivation of a new consensus sequence

1 reference

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23 August 2017

Free-radical mechanisms involved in the formation of sequence-dependent bistranded DNA lesions by the antitumor antibiotics bleomycin, neocarzinostatin, and calicheamicin

1 reference

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23 August 2017

Further characterisation of the cellular activity of the DNA-PK inhibitor, NU7441, reveals potential cross-talk with homologous recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3950721

6 September 2017

trans Autophosphorylation at DNA-dependent protein kinase's two major autophosphorylation site clusters facilitates end processing but not end joining

1 reference

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14 September 2017

Revision of consensus sequence of human Alu repeats--a review

1 reference

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14 September 2017

DNA damage and mutagenesis by radiomimetic DNA-cleaving agents: bleomycin, neocarzinostatin and other enediynes

1 reference

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28 September 2017

Absence of p350 subunit of DNA-activated protein kinase from a radiosensitive human cell line

1 reference

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28 September 2017

CtIP and MRN promote non-homologous end-joining of etoposide-induced DNA double-strand breaks in G1.

1 reference

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25 June 2018

Partial nucleotide sequence of the 300-nucleotide interspersed repeated human DNA sequences.

1 reference

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25 June 2018

Effect of apurinic/apyrimidinic endonucleases and polyamines on DNA treated with bleomycin and neocarzinostatin: specific formation and cleavage of closely opposed lesions in complementary strands

1 reference

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25 June 2018

Neocarzinostatin-mediated DNA damage in a model AGT.ACT site: mechanistic studies of thiol-sensitive partitioning of C4' DNA damage products

1 reference

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25 June 2018

Tdp1 protects against oxidative DNA damage in non-dividing fission yeast

1 reference

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Synthesis and characterization of oligonucleotides containing a 4'-keto abasic site

1 reference

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1 reference

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1 September 2018

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1 reference

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1 September 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/24371269

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stabilization of neocarzinostatin nonprotein chromophore activity by interaction with apoprotein and with HeLa cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/24371269

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence-specific double-strand breakage of DNA by neocarzinostatin involves different chemical mechanisms within a staggered cleavage site

1 reference

https://pubmed.ncbi.nlm.nih.gov/24371269

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Neocarzinostatin chromophore binds to deoxyribonucleic acid by intercalation

1 reference

https://pubmed.ncbi.nlm.nih.gov/24371269

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of 2-deoxyribonolactone at the site of neocarzinostatin-induced cytosine release in the sequence d(AGC)

1 reference

https://pubmed.ncbi.nlm.nih.gov/24371269

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKT1347

1 reference

Europe PubMed Central

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12 June 2020

1 reference

Europe PubMed Central

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12 June 2020

1 reference

Europe PubMed Central

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12 June 2020

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