(Q37724891)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

title

Transcriptomic profiling of 39 commonly-used neuroblastoma cell lines (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

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corrigendum / erratum

Corrigendum: Transcriptomic profiling of 39 commonly-used neuroblastoma cell lines

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author

Jo Lynne Harenza

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

9

C Patrick Reynolds

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

10

John M Maris

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

author name string

Maura A Diamond

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Rebecca N Adams

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Michael M Song

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Heather L Davidson

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Lori S Hart

6

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Maiah H Dent

7

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

Paolo Fortina

8

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

publication date

28 March 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

volume

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

page(s)

170033

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

14 March 2020

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10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=5369315

DESeq2

object named as

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

limma

object named as

limma

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1038/sdata.2017.33

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cites work

Near-optimal probabilistic RNA-seq quantification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

DNA methylation profiling of primary neuroblastoma tumors using methyl-CpG-binding domain sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

HISAT: a fast spliced aligner with low memory requirements

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

limma powers differential expression analyses for RNA-sequencing and microarray studies

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

STAR: ultrafast universal RNA-seq aligner

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

RNAi screen of the protein kinome identifies checkpoint kinase 1 (CHK1) as a therapeutic target in neuroblastoma

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Integrative genomics identifies LMO1 as a neuroblastoma oncogene

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

National Cancer Institute pediatric preclinical testing program: model description for in vitro cytotoxicity testing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Distinctive Characteristics of the Sympathicoblastoma Cultivated in Vitro: A Method for Prompt Diagnosis.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

ToppGene Suite for gene list enrichment analysis and candidate gene prioritization

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

High-resolution analysis of 3p deletion in neuroblastoma and differential methylation of the SEMA3B tumor suppressor gene

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Gene ontology: tool for the unification of biology

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

23 August 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

23 August 2017

https://api.crossref.org/works/10.1038%2FSDATA.2017.33

Preclinical Therapeutic Synergy of MEK1/2 and CDK4/6 Inhibition in Neuroblastoma

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Integrative Genome-Scale Analysis Identifies Epigenetic Mechanisms of Transcriptional Deregulation in Unfavorable Neuroblastomas

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Advances in the translational genomics of neuroblastoma: From improving risk stratification and revealing novel biology to identifying actionable genomic alterations

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Histone deacetylase 1 gene expression and sensitization of multidrug-resistant neuroblastoma cell lines to cytotoxic agents by depsipeptide

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

High-resolution analysis of allelic imbalance in neuroblastoma cell lines by single nucleotide polymorphism arrays

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Credentialing preclinical pediatric xenograft models using gene expression and tissue microarray analysis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Phenotypic diversification in human neuroblastoma cells: expression of distinct neural crest lineages

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Identification of 2 putative critical segments of 17q gain in neuroblastoma through integrative genomics.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

Coordinate morphological and biochemical interconversion of human neuroblastoma cells.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5369315

1 September 2018

1 reference

https://api.crossref.org/works/10.1038%2FSDATA.2017.33

21 January 2018

Identifiers

DOI

10.1038/SDATA.2017.33

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28350380%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

PubMed publication ID

28350380

1 reference