(Q37765357)

22 August 2017

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title

An integrated view of molecular coevolution in protein-protein interactions (English)

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protein-protein interaction

22 August 2017

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1

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22 August 2017

David L Robertson

2

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22 August 2017

publication date

14 June 2010

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Molecular Biology and Evolution

22 August 2017

published in

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22 August 2017

volume

27

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22 August 2017

issue

11

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22 August 2017

page(s)

2567-2575

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Comparative analysis of the Saccharomyces cerevisiae and Caenorhabditis elegans protein interaction networks

22 August 2017

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Discovery of uncharacterized cellular systems by genome-wide analysis of functional linkages

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Why highly expressed proteins evolve slowly

21 January 2018

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A single determinant dominates the rate of yeast protein evolution

21 January 2018

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A model-based approach for detecting coevolving positions in a molecule.

21 January 2018

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Butterflies and Plants: A Study in Coevolution

21 January 2018

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Conservation and topology of protein interaction networks under duplication-divergence evolution

21 January 2018

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CAPS: coevolution analysis using protein sequences.

21 January 2018

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Influence of conservation on calculations of amino acid covariance in multiple sequence alignments

21 January 2018

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Evolutionary rate in the protein interaction network

21 January 2018

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Mutual information in protein multiple sequence alignments reveals two classes of coevolving positions.

21 January 2018

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21 January 2018

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21 January 2018

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Co-evolutionary analysis reveals insights into protein-protein interactions.

21 January 2018

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Specificity in protein interactions and its relationship with sequence diversity and coevolution

21 January 2018

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Protein sectors: evolutionary units of three-dimensional structure

21 January 2018

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A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.

21 January 2018

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Protein dispensability and rate of evolution

21 January 2018

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Enhancing the prediction of protein pairings between interacting families using orthology information

21 January 2018

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Co-evolutionary analysis of domains in interacting proteins reveals insights into domain-domain interactions mediating protein-protein interactions

21 January 2018

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High-confidence prediction of global interactomes based on genome-wide coevolutionary networks

21 January 2018

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Co-evolution and co-adaptation in protein networks

21 January 2018

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Predicting protein domain interactions from coevolution of conserved regions

21 January 2018

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21 January 2018

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21 January 2018

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Coevolution at protein complex interfaces can be detected by the complementarity trace with important impact for predictive docking

21 January 2018

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21 January 2018

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21 January 2018

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Structure, function, and evolution of transient and obligate protein-protein interactions

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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An integrated view of protein evolution

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Protein co-evolution, co-adaptation and interactions

21 January 2018

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21 January 2018

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Evolution of protein complexes by duplication of homomeric interactions

21 January 2018

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Reconstruction of ancestral protein interaction networks for the bZIP transcription factors.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Coevolving protein residues: maximum likelihood identification and relationship to structure.

21 January 2018

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The evolutionary dynamics of the Saccharomyces cerevisiae protein interaction network after duplication

21 January 2018

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Partial correlation coefficient between distance matrices as a new indicator of protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

21 January 2018

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Modularity of the transcriptional response of protein complexes in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Transcriptional regulation of protein complexes in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Evolutionary information for specifying a protein fold

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Evolution at the system level: the natural history of protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Evolutionarily conserved networks of residues mediate allosteric communication in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Allelic imbalance analysis by high-density single-nucleotide polymorphic allele (SNP) array with whole genome amplified DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Phylogenetic methodology for detecting protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Functional genomic analysis of the rates of protein evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

A complex-based reconstruction of the Saccharomyces cerevisiae interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Context dependence and coevolution among amino acid residues in proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

The effect of sequence evolution on protein structural divergence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Visualizing and quantifying molecular goodness-of-fit: small-probe contact dots with explicit hydrogen atoms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Detecting coevolution in and among protein domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

High-quality binary protein interaction map of the yeast interactome network

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Why do hubs in the yeast protein interaction network tend to be essential: reexamining the connection between the network topology and essentiality

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Comparison of solvent-inaccessible cores of homologous proteins: definitions useful for protein modelling

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Functional coevolutionary networks of the Hsp70-Hop-Hsp90 system revealed through computational analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

A Study of the Coevolutionary Patterns Operating within the env Gene of the HIV-1 Group M Subtypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

The proteins of linked genes evolve at similar rates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

Protein Function, Connectivity, and Duplicability in Yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSQ144

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MSQ144

1 reference

22 August 2017

1 reference