(Q37970068)

26 August 2017

Comparison of the two major classes of assembly algorithms: overlap-layout-consensus and de-bruijn-graph (English)

1 reference

26 August 2017

0 references

12

1 reference

26 August 2017

Xuesong Hu

9

0 references

author name string

Zhenyu Li

1

1 reference

26 August 2017

Yanxiang Chen

2

1 reference

26 August 2017

Desheng Mu

3

1 reference

26 August 2017

Jianying Yuan

4

1 reference

26 August 2017

Yujian Shi

5

1 reference

26 August 2017

Hao Zhang

6

1 reference

26 August 2017

Jun Gan

7

1 reference

26 August 2017

Nan Li

8

1 reference

26 August 2017

Binghang Liu

10

1 reference

26 August 2017

Bicheng Yang

11

1 reference

26 August 2017

19 December 2011

1 reference

Briefings in functional genomics

26 August 2017

1 reference

26 August 2017

11

1 reference

26 August 2017

1

1 reference

26 August 2017

25-37

1 reference

Sense from sequence reads: methods for alignment and assembly

26 August 2017

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Assembly algorithms for next-generation sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Assembly of large genomes using second-generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

The diploid genome sequence of an Asian individual

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

High-throughput gene mapping in Caenorhabditis elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

A whole-genome assembly of Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

CAP3: A DNA sequence assembly program

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

21 January 2018

The phusion assembler

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

A new algorithm for DNA sequence assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

An Eulerian path approach to DNA fragment assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

De novo fragment assembly with short mate-paired reads: Does the read length matter?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

ABySS: a parallel assembler for short read sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

The genome of the cucumber, Cucumis sativus L

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

The sequence and de novo assembly of the giant panda genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Assemblies: the good, the bad, the ugly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Limitations of next-generation genome sequence assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

A strategy of DNA sequencing employing computer programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

A general coverage theory for shotgun DNA sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

A draft sequence for the genome of the domesticated silkworm (Bombyx mori).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

The Genomes of Oryza sativa: a history of duplications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Genomic mapping by fingerprinting random clones: a mathematical analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Eukaryotic genome size databases

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Discovering and detecting transposable elements in genome sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Mouse segmental duplication and copy number variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Sequencing technologies - the next generation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

An integrated semiconductor device enabling non-optical genome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Accurate whole human genome sequencing using reversible terminator chemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Phenotypic connections in surprising places

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

SHREC: a short-read error correction method

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

ECHO: a reference-free short-read error correction algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Reptile: representative tiling for short read error correction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

RePS: a sequence assembler that masks exact repeats identified from the shotgun data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Scaffolding pre-assembled contigs using SSPACE

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Pebble and rock band: heuristic resolution of repeats and scaffolding in the velvet short-read de novo assembler

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

SOPRA: Scaffolding algorithm for paired reads via statistical optimization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Genome assembly reborn: recent computational challenges

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

An algorithm for automated closure during assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Optimized multiplex PCR: efficiently closing a whole-genome shotgun sequencing project.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Efficient construction of an assembly string graph using the FM-index

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

Aggressive assembly of pyrosequencing reads with mates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELR035

21 January 2018

Identifiers

DOI

10.1093/BFGP/ELR035

1 reference

26 August 2017

1 reference