(Q38034483)

27 August 2017

title

Promoter engineering: recent advances in controlling transcription at the most fundamental level (English)

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27 August 2017

John Blazeck

1

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27 August 2017

Hal S Alper

series ordinal

2

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27 August 2017

publication date

14 August 2012

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27 August 2017

published in

Biotechnology Journal

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27 August 2017

volume

8

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27 August 2017

issue

1

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27 August 2017

page(s)

46-58

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Systems metabolic engineering: genome-scale models and beyond

27 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Toward a science of metabolic engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Synthetic biology: tools to design, build, and optimize cellular processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Automated design of synthetic ribosome binding sites to control protein expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Synthetic RNA modules for fine-tuning gene expression levels in yeast by modulating RNase III activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

A synthetic library of RNA control modules for predictable tuning of gene expression in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Transcriptional activation by artificial recruitment in yeast is influenced by promoter architecture and downstream sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Transcriptional activation by recruitment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

On the consensus structure within the E. coli promoters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, sigmaE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Assay of Escherichia coli RNA polymerase: sigma-core interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Transcriptional regulation in Saccharomyces cerevisiae: transcription factor regulation and function, mechanisms of initiation, and roles of activators and coactivators.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Structure of an RNA Polymerase II-TFIIB Complex and the Transcription Initiation Mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

The RNA polymerase II core promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Bacterial RNA polymerases: the wholo story

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

RNA polymerase II-TFIIB structure and mechanism of transcription initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Perspectives on the RNA polymerase II core promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

The RNA polymerase II core promoter - the gateway to transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Identification and distinct regulation of yeast TATA box-containing genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Mapping of transcription start sites in Saccharomyces cerevisiae using 5' SAGE

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Each of three "TATA elements" specifies a subset of the transcription initiation sites at the CYC-1 promoter of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

PReMod: a database of genome-wide mammalian cis-regulatory module predictions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

High-resolution DNA-binding specificity analysis of yeast transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

SCPD: a promoter database of the yeast Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

EcoCyc: a comprehensive database resource for Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

How transcription factors can adjust the gene expression floodgates

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Fine tuning gene expression through short DNA-protein binding cycles

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Combinatorial promoter design for engineering noisy gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Programming gene expression with combinatorial promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Saccharomyces cerevisiae GAL1-GAL10 divergent promoter region: location and function of the upstream activating sequence UASG.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Cloning and expression of the gene for bacteriophage T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Modified bacteriophage lambda promoter vectors for overproduction of proteins in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Manufacturing molecules through metabolic engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

The tac promoter: a functional hybrid derived from the trp and lac promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Metabolic engineering of Escherichia coli for 1-butanol production.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Metabolic engineering of Escherichia coli for the production of polylactic acid and its copolymers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Metabolic engineering of Escherichia coli for biotechnological production of high-value organic acids and alcohols.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Biofuel production in Escherichia coli: the role of metabolic engineering and synthetic biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Expanding the chemical palate of cells by combining systems biology and metabolic engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Cloning of Saccharomyces cerevisiae promoters using a probe vector based on phleomycin resistance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Identification of novel HXT genes in Saccharomyces cerevisiae reveals the impact of individual hexose transporters on glycolytic flux

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Isolation and identification of yeast messenger ribonucleic acids coding for enolase, glyceraldehyde-3-phosphate dehydrogenase, and phosphoglycerate kinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Introduction and expression of genes for metabolic engineering applications in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Progress in metabolic engineering of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Shuffling of promoters for multiple genes to optimize xylose fermentation in an engineered Saccharomyces cerevisiae strain

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Engineering of Saccharomyces cerevisiae for efficient anaerobic alcoholic fermentation of L-arabinose

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Production of the antimalarial drug precursor artemisinic acid in engineered yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Engineering of the pyruvate dehydrogenase bypass in Saccharomyces cerevisiae for high-level production of isoprenoids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Reconstruction of a bacterial isoprenoid biosynthetic pathway in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Metabolic engineering of Saccharomyces cerevisiae for the production of n-butanol

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Tuning genetic control through promoter engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Engineering of promoter replacement cassettes for fine-tuning of gene expression in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Linking yeast Gcn5p catalytic function and gene regulation using a quantitative, graded dominant mutant approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Engineering promoter regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Identifying functionally important mutations from phenotypically diverse sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Functional promoter analysis using an approach based on an in vitro evolution strategy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Generation of a strong promoter for Escherichia coli from eukaryotic genome DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Modulation of gene expression made easy

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Construction and model-based analysis of a promoter library for E. coli: an indispensable tool for metabolic engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

A synthetic promoter library for constitutive gene expression in Lactobacillus plantarum

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Synthetic promoter libraries--tuning of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Response to Hammer et al.: Tuning genetic control--importance of thorough promoter characterization versus generating promoter diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Generation of a synthetic mammalian promoter library by modification of sequences spacing transcription factor binding sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

The level of glucose‐6‐phosphate dehydrogenase activity strongly influences xylose fermentation and inhibitor sensitivity in recombinant Saccharomyces cerevisiae strains

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Activation mechanism of the multifunctional transcription factor repressor-activator protein 1 (Rap1p)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Tripartite upstream promoter element essential for expression of Saccharomyces cerevisiae ribosomal protein genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Rational diversification of a promoter providing fine-tuned expression and orthogonal regulation for synthetic biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Diversity-based, model-guided construction of synthetic gene networks with predicted functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

A 28-bp segment of the Saccharomyces cerevisiae PHO5 upstream activator sequence confers phosphate control to the CYC1-lacZ gene fusion

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Upstream activation sites of the CYC1 gene of Saccharomyces cerevisiae are active when inverted but not when placed downstream of the "TATA box"

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

A GAL10-CYC1 hybrid yeast promoter identifies the GAL4 regulatory region as an upstream site

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Multiple mechanisms provide rapid and stringent glucose repression of GAL gene expression in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Two upstream activation sequences control the expression of the XPR2 gene in the yeast Yarrowia lipolytica

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Heterologous protein expression and secretion in the non-conventional yeast Yarrowia lipolytica: a review.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Tuning gene expression in Yarrowia lipolytica by a hybrid promoter approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Controlling promoter strength and regulation in Saccharomyces cerevisiae using synthetic hybrid promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Tandem promoter/enhancer units create a versatile regulatory element for the expression of genes in mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Chimeric transcriptional control units for improved liver-specific transgene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Rational design of a super core promoter that enhances gene expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Construction of strong mammalian promoters by random cis-acting element elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Promoter library designed for fine-tuned gene expression in Pichia pastoris

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Innovation at the intersection of synthetic and systems biology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Massively parallel functional dissection of mammalian enhancers in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Analysis of combinatorial cis-regulation in synthetic and genomic promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Re-engineering multicloning sites for function and convenience

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

Use of the tetracycline promoter for the tightly regulated production of a murine antibody fragment in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201200120

21 January 2018

Identifiers

DOI

10.1002/BIOT.201200120

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27 August 2017

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