(Q38084751)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

title

The heat shock response: A case study of chromatin dynamics in gene regulation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

author name string

Steven Henikoff

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

language of work or name

1 reference

13 February 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

Biochemistry and Cell Biology

24 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

volume

91

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

page(s)

42-48

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

Heat shock factors: integrators of cell stress, development and lifespan.

24 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Nucleosome-depleted regions in cell-cycle-regulated promoters ensure reliable gene expression in every cell cycle

21 January 2018

1 reference

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DNA topoisomerase I inhibition by camptothecin induces escape of RNA polymerase II from promoter-proximal pause site, antisense transcription and histone acetylation at the human HIF-1alpha gene locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Structure and basal transcription complex of RNA polymerase II core promoters in the mammalian genome: an overview

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Transcription within condensed chromatin: Steric hindrance facilitates elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

The organization of nucleosomes around splice sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

High-resolution mapping of DNase I-hypersensitive sites of Drosophila heat shock genes in Drosophila melanogaster and Saccharomyces cerevisiae

21 January 2018

1 reference

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High resolution microanalysis and three-dimensional nucleosome structure associated with transcribing chromatin.

21 January 2018

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Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones

21 January 2018

1 reference

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Functional interplay between chromatin remodeling complexes RSC, SWI/SNF and ISWI in regulation of yeast heat shock genes

21 January 2018

1 reference

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Promoting elongation with transcript cleavage stimulatory factors

21 January 2018

1 reference

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Positive supercoiling of DNA greatly diminishes mRNA synthesis in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Chromatin Landscape Dictates HSF Binding to Target DNA Elements

21 January 2018

1 reference

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Accurate prediction of inducible transcription factor binding intensities in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Nucleosome assembly depends on the torsion in the DNA molecule: a magnetic tweezers study

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Nucleosome destabilization in the epigenetic regulation of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Epigenome characterization at single base-pair resolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Atomic force microscopy demonstrates a critical role of DNA superhelicity in nucleosome dynamics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Localization of RNA polymerase in polytene chromosomes of Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Translating the Histone Code

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Nucleosome stability mediated by histone variants H3.3 and H2A.Z.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Synergistic action of RNA polymerases in overcoming the nucleosomal barrier.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Positional dependence of transcriptional inhibition by DNA torsional stress in yeast chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Chromatin particle spectrum analysis: a method for comparative chromatin structure analysis using paired-end mode next-generation DNA sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Gene-specific RNA polymerase II phosphorylation and the CTD code

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Nucleosome remodeling induced by RNA polymerase II: loss of the H2A/H2B dimer during transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

RNA polymerase complexes cooperate to relieve the nucleosomal barrier and evict histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Paused RNA polymerase II as a developmental checkpoint

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Chromatin fine structure of active and repressed genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Promoter proximal pausing and the control of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Regulation of protein synthesis during heat shock

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Supercoiling of the DNA template during transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

(CT)n (GA)n repeats and heat shock elements have distinct roles in chromatin structure and transcriptional activation of the Drosophila hsp26 gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Crystal structure of the nucleosome core particle at 2.8 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

The mechanism of nucleosome traversal by RNA polymerase II: roles for template uncoiling and transcript elongation factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Purification of P-TEFb, a transcription factor required for the transition into productive elongation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Control of RNA polymerase II elongation potential by a novel carboxyl-terminal domain kinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Nucleosome organization in the Drosophila genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Localization of RNA from heat-induced polysomes at puff sites in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Interactions between DSIF (DRB sensitivity inducing factor), NELF (negative elongation factor), and the Drosophila RNA polymerase II transcription elongation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Genome-scale profiling of histone H3.3 replacement patterns.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Controlling the elongation phase of transcription with P-TEFb

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Combinatorial complexity in chromatin structure and function: revisiting the histone code

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Comprehensive genome-wide protein-DNA interactions detected at single-nucleotide resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Transcriptional activation triggers deposition and removal of the histone variant H3.3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

The transcription cycle in eukaryotes: from productive initiation to RNA polymerase II recycling

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Stress-dependent dynamics of global chromatin remodeling in yeast: dual role for SWI/SNF in the heat shock stress response

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

HSF access to heat shock elements in vivo depends critically on promoter architecture defined by GAGA factor, TFIID, and RNA polymerase II binding sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Heat shock reduces stalled RNA polymerase II and nucleosome turnover genome-wide

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Protein synthesis in salivary glands of Drosophila melanogaster: relation to chromosome puffs

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

H2A.Z nucleosomes enriched over active genes are homotypic

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Gene silencing in X-chromosome inactivation: advances in understanding facultative heterochromatin formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

B2 RNA and Alu RNA repress transcription by disrupting contacts between RNA polymerase II and promoter DNA within assembled complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

P-TEFb-mediated phosphorylation of hSpt5 C-terminal repeats is critical for processive transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

How are nucleosomes disrupted during transcription elongation?

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FBCB-2012-0075

21 January 2018

Identifiers

DOI

10.1139/BCB-2012-0075

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23442140%20AND%20SRC:MED&resulttype=core&format=json

release_xd7ui3ogqvbehm5lwrwmcytdei

24 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/xd7ui3ogqvbehm5lwrwmcytdei

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference