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Co-translational protein targeting to the bacterial membrane
scientific article published on 24 October 2013
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scholarly article
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stated in
Europe PubMed Central
PMCID
3999308
retrieved
30 August 2017
title
Co-translational protein targeting to the bacterial membrane
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3999308
retrieved
30 August 2017
author
Ishu Saraogi
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
author name string
Shu-ou Shan
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
language of work or name
English
0 references
publication date
24 October 2013
1 reference
stated in
Europe PubMed Central
PMCID
3999308
retrieved
30 August 2017
published in
Biochimica et Biophysica Acta
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
volume
1843
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
issue
8
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
page(s)
1433-1441
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
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Crystal structure of the ribonucleoprotein core of the signal recognition particle
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YidC, the Escherichia coli homologue of mitochondrial Oxa1p, is a component of the Sec translocase
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The translocon: a dynamic gateway at the ER membrane
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Protein targeting to the bacterial cytoplasmic membrane.
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Crystal structure of the signal sequence binding subunit of the signal recognition particle
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Signal sequence recognition in cotranslational translocation by protein components of the endoplasmic reticulum membrane
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
6 September 2017
Structure of the conserved GTPase domain of the signal recognition particle
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
6 September 2017
Functional substitution of the signal recognition particle 54-kDa subunit by its Escherichia coli homolog
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
6 September 2017
Intracellular protein topogenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
6 September 2017
Photocrosslinking of the signal sequence of nascent preprolactin to the 54-kilodalton polypeptide of the signal recognition particle
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
6 September 2017
Model for signal sequence recognition from amino-acid sequence of 54K subunit of signal recognition particle
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
6 September 2017
Requirement of GTP Hydrolysis for Dissociation of the Signal Recognition Particle from Its Receptor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
6 September 2017
Enzyme hyperspecificity. Rejection of threonine by the valyl-tRNA synthetase by misacylation and hydrolytic editing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
6 September 2017
Translation-independent localization of mRNA in E. coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
14 September 2017
FtsY, the bacterial signal-recognition particle receptor, interacts functionally and physically with the SecYEG translocon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
14 September 2017
Anionic phospholipids are involved in membrane association of FtsY and stimulate its GTPase activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
14 September 2017
The core Escherichia coli signal recognition particle receptor contains only the N and G domains of FtsY
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
28 September 2017
Mechanisms of helicase-catalyzed DNA unwinding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
28 September 2017
Signal sequences: the same yet different
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
28 September 2017
An alternative protein targeting pathway in Escherichia coli: studies on the role of FtsY.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
28 September 2017
The affinity of signal recognition particle for presecretory proteins is dependent on nascent chain length
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
28 September 2017
Genetic evidence for functional interaction of the Escherichia coli signal recognition particle receptor with acidic lipids in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
28 September 2017
The methionine-rich domain of the 54 kd protein subunit of the signal recognition particle contains an RNA binding site and can be crosslinked to a signal sequence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
28 September 2017
Elucidating the native architecture of the YidC: ribosome complex.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Signal sequence-independent SRP-SR complex formation at the membrane suggests an alternative targeting pathway within the SRP cycle
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Synergistic actions between the SRP RNA and translating ribosome allow efficient delivery of the correct cargos during cotranslational protein targeting
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Sequential checkpoints govern substrate selection during cotranslational protein targeting
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
YidC and Oxa1 form dimeric insertion pores on the translating ribosome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Signal sequences activate the catalytic switch of SRP RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Demonstration of a multistep mechanism for assembly of the SRP x SRP receptor complex: implications for the catalytic role of SRP RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Escherichia coli signal recognition particle receptor FtsY contains an essential and autonomous membrane-binding amphipathic helix.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
SRP RNA provides the physiologically essential GTPase activation function in cotranslational protein targeting
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Structure of the E. coli signal recognition particle bound to a translating ribosome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Conformations of the signal recognition particle protein Ffh from Escherichia coli as determined by FRET.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Domain rearrangement of SRP protein Ffh upon binding 4.5S RNA and the SRP receptor FtsY
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
F1F0 ATP synthase subunit c is a substrate of the novel YidC pathway for membrane protein biogenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Conformational change of the N-domain on formation of the complex between the GTPase domains of Thermus aquaticus Ffh and FtsY.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Reconstitution of Sec-dependent membrane protein insertion: nascent FtsQ interacts with YidC in a SecYEG-dependent manner
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Important role of the tetraloop region of 4.5S RNA in SRP binding to its receptor FtsY.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Co-translational protein targeting catalyzed by the Escherichia coli signal recognition particle and its receptor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Basic mechanisms of transcript elongation and its regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
SecA protein is required for secretory protein translocation into E. coli membrane vesicles.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Human SRP RNA and E. coli 4.5S RNA contain a highly homologous structural domain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
The ATPase activity of SecA is regulated by acidic phospholipids, SecY, and the leader and mature domains of precursor proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
An E. coli Ribonucleoprotein Containing 4.5 S RNA Resembles Mammalian Signal Recognition Particle
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
23 June 2018
Dynamic switch of the signal recognition particle from scanning to targeting.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
SecA interacts with ribosomes in order to facilitate posttranslational translocation in bacteria.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
Conformation of the signal recognition particle in ribosomal targeting complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
Signal sequence-independent membrane targeting of ribosomes containing short nascent peptides within the exit tunnel
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
A cleavable N-terminal membrane anchor is involved in membrane binding of the Escherichia coli SRP receptor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
Membrane targeting of ribosomes and their release require distinct and separable functions of FtsY.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
An essential role for the DnaK molecular chaperone in stabilizing over-expressed substrate proteins of the bacterial twin-arginine translocation pathway.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
RNA-mediated interaction between the peptide-binding and GTPase domains of the signal recognition particle.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
The signal recognition particle binds to protein L23 at the peptide exit of the Escherichia coli ribosome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
Signal recognition particle binds to ribosome-bound signal sequences with fluorescence-detected subnanomolar affinity that does not diminish as the nascent chain lengthens.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
SecDFyajC forms a heterotetrameric complex with YidC.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
Role of SRP RNA in the GTPase cycles of Ffh and FtsY.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
Architecture of the protein-conducting channel associated with the translating 80S ribosome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
SRP samples nascent chains for the presenceof signal sequences by interacting with ribosomes at a discrete step during translation elongation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
31 August 2018
The Bacterial SRP Receptor, SecA and the Ribosome Use Overlapping Binding Sites on the SecY Translocon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3999308
retrieved
3 December 2018
Subunit a of the F1F0 ATP Synthase Requires YidC and SecYEG for Membrane Insertion
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24513458
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Subunit a of CytochromeoOxidase Requires Both YidC and SecYEG for Membrane Insertion
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24513458
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The Sec61p complex mediates the integration of a membrane protein by allowing lipid partitioning of the transmembrane domain
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24513458
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
YidC mediates membrane protein insertion in bacteria
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24513458
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The signal sequence of nascent preprolactin interacts with the 54K polypeptide of the signal recognition particle
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/24513458
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.BBAMCR.2013.10.013
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
PMCID
3999308
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
PubMed ID
24513458
1 reference
stated in
Europe PubMed Central
PMCID
3999308
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24513458%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 June 2020
ResearchGate publication ID
260151977
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