(Q38254276)

1 September 2017

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title

The influence of Argonaute proteins on alternative RNA splicing (English)

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1 September 2017

Eric Batsché

1

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1 September 2017

Maya Ameyar-Zazoua

series ordinal

2

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1 September 2017

publication date

25 September 2014

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Wiley interdisciplinary reviews. RNA

1 September 2017

published in

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1 September 2017

volume

6

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1 September 2017

issue

1

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1 September 2017

page(s)

141-156

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Small RNA-mediated gene silencing pathways in C. elegans

1 September 2017

cites work

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RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond

21 January 2018

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The Argonaute protein family

21 January 2018

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Control of alternative splicing through siRNA-mediated transcriptional gene silencing.

21 January 2018

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Argonaute proteins couple chromatin silencing to alternative splicing.

21 January 2018

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Expanding the action of duplex RNAs into the nucleus: redirecting alternative splicing

21 January 2018

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Two new and distinct roles for Drosophila Argonaute-2 in the nucleus: alternative pre-mRNA splicing and transcriptional repression.

21 January 2018

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Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

21 January 2018

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Alternative isoform regulation in human tissue transcriptomes

21 January 2018

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The spliceosome: design principles of a dynamic RNP machine

21 January 2018

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Spliceosome structure: piece by piece

21 January 2018

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Functional consequences of developmentally regulated alternative splicing

21 January 2018

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Exon and intron definition in pre-mRNA splicing

21 January 2018

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RS domains contact the pre-mRNA throughout spliceosome assembly

21 January 2018

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Evolution of SR protein and hnRNP splicing regulatory factors

21 January 2018

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Functional diversity of the hnRNPs: past, present and perspectives

21 January 2018

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The SR protein family of splicing factors: master regulators of gene expression

21 January 2018

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A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons

21 January 2018

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Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1

21 January 2018

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Emerging roles for Sam68 in adipogenesis and neuronal development

21 January 2018

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ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing

21 January 2018

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The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen targeted in POMA patients with dementia

21 January 2018

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Splice site selection, rate of splicing, and alternative splicing on nascent transcripts

21 January 2018

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Splicing precedes polyadenylation during Drosophila E74A transcription

21 January 2018

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Splicing of Balbiani ring 1 gene pre-mRNA occurs simultaneously with transcription.

21 January 2018

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Cotranscriptional spliceosome assembly dynamics and the role of U1 snRNA:5'ss base pairing in yeast

21 January 2018

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A genome-wide analysis indicates that yeast pre-mRNA splicing is predominantly posttranscriptional

21 January 2018

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Nascent-seq indicates widespread cotranscriptional pre-mRNA splicing in Drosophila

21 January 2018

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Cotranscriptional splicing efficiency differs dramatically between Drosophila and mouse

21 January 2018

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The in vivo kinetics of RNA polymerase II elongation during co-transcriptional splicing

21 January 2018

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Single-molecule imaging of transcriptionally coupled and uncoupled splicing

21 January 2018

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Splicing kinetics and transcript release from the chromatin compartment limit the rate of Lipid A-induced gene expression

21 January 2018

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Multiple links between transcription and splicing

21 January 2018

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Splicing, transcription, and chromatin: a ménage à trois

21 January 2018

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Alternative splicing: a pivotal step between eukaryotic transcription and translation

21 January 2018

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Dynamic integration of splicing within gene regulatory pathways

21 January 2018

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A slow RNA polymerase II affects alternative splicing in vivo

21 January 2018

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First come, first served revisited: factors affecting the same alternative splicing event have different effects on the relative rates of intron removal

21 January 2018

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Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation

21 January 2018

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Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals.

21 January 2018

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How slow RNA polymerase II elongation favors alternative exon skipping.

21 January 2018

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The human SWI/SNF subunit Brm is a regulator of alternative splicing

21 January 2018

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Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons.

21 January 2018

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CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

21 January 2018

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Neuronal cell depolarization induces intragenic chromatin modifications affecting NCAM alternative splicing.

21 January 2018

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Splicing-dependent RNA polymerase pausing in yeast

21 January 2018

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RNA polymerase II C-terminal domain mediates regulation of alternative splicing by SRp20.

21 January 2018

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Cracking the RNA polymerase II CTD code

21 January 2018

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Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation

21 January 2018

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Psip1/Ledgf p52 binds methylated histone H3K36 and splicing factors and contributes to the regulation of alternative splicing

21 January 2018

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CBX3 regulates efficient RNA processing genome-wide

21 January 2018

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Dynamic histone acetylation is critical for cotranscriptional spliceosome assembly and spliceosomal rearrangements

21 January 2018

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The C-terminal domain of Brd2 is important for chromatin interaction and regulation of transcription and alternative splicing.

21 January 2018

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Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells

21 January 2018

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RNAi-mediated targeting of heterochromatin by the RITS complex

21 January 2018

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Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs.

21 January 2018

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RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production

21 January 2018

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High-Affinity Binding of Chp1 Chromodomain to K9 Methylated Histone H3 Is Required to Establish Centromeric Heterochromatin

21 January 2018

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Genome-wide identification of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families and their expression analyses in response to viral infection and abiotic stresses in Solanum lycopersicum.

21 January 2018

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Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3.

21 January 2018

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piRNAs can trigger a multigenerational epigenetic memory in the germline of C. elegans

21 January 2018

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Slicer and the argonautes

21 January 2018

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RNA interference in human cells is restricted to the cytoplasm

21 January 2018

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Efficient reduction of target RNAs by small interfering RNA and RNase H-dependent antisense agents. A comparative analysis

21 January 2018

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Detection of the argonaute protein Ago2 and microRNAs in the RNA induced silencing complex (RISC) using a monoclonal antibody

21 January 2018

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The rough endoplasmatic reticulum is a central nucleation site of siRNA-mediated RNA silencing

21 January 2018

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Small interfering RNA-induced transcriptional gene silencing in human cells

21 January 2018

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Small RNA-induced transcriptional gene regulation in mammals mechanisms, therapeutic applications, and scope within the genome

21 January 2018

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Specific and potent RNAi in the nucleus of human cells

21 January 2018

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A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response

21 January 2018

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Long non-coding RNA MALAT-1 overexpression predicts tumor recurrence of hepatocellular carcinoma after liver transplantation

21 January 2018

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Lentivirus-mediated RNA interference targeting the H19 gene inhibits cell proliferation and apoptosis in human choriocarcinoma cell line JAR

21 January 2018

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A multifunctional human Argonaute2-specific monoclonal antibody

21 January 2018

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Expanded RNA-binding activities of mammalian Argonaute 2.

21 January 2018

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Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter

21 January 2018

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Senescence is an endogenous trigger for microRNA-directed transcriptional gene silencing in human cells

21 January 2018

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Ago1 Interacts with RNA polymerase II and binds to the promoters of actively transcribed genes in human cancer cells

21 January 2018

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RNAi factors are present and active in human cell nuclei

21 January 2018

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An RNA-dependent RNA polymerase formed by TERT and the RMRP RNA

21 January 2018

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RNA polymerase II acts as an RNA-dependent RNA polymerase to extend and destabilize a non-coding RNA

21 January 2018

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Promoter-associated small double-stranded RNA interacts with heterogeneous nuclear ribonucleoprotein A2/B1 to induce transcriptional activation

21 January 2018

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Identification of novel argonaute-associated proteins

21 January 2018

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Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells

21 January 2018

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Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs

21 January 2018

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Lamin A/C speckles mediate spatial organization of splicing factor compartments and RNA polymerase II transcription

21 January 2018

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Novel progerin-interactive partner proteins hnRNP E1, EGF, Mel 18, and UBC9 interact with lamin A/C

21 January 2018

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Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex

21 January 2018

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Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis

21 January 2018

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Small nuclear ribonucleoprotein remodeling during catalytic activation of the spliceosome.

21 January 2018

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Comprehensive proteomic analysis of the human spliceosome

21 January 2018

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Regulation of CD44 alternative splicing by SRm160 and its potential role in tumor cell invasion

21 January 2018

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SIRT1 undergoes alternative splicing in a novel auto-regulatory loop with p53.

21 January 2018

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Protein kinase CK1alphaLS promotes vascular cell proliferation and intimal hyperplasia.

21 January 2018

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Smooth muscle phenotypic diversity is mediated through alterations in myocardin gene splicing

21 January 2018

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A deacetylase-deficient SIRT1 variant opposes full-length SIRT1 in regulating tumor suppressor p53 and governs expression of cancer-related genes

21 January 2018

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Pyruvate kinase M2-specific siRNA induces apoptosis and tumor regression

21 January 2018

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The MicroRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing

21 January 2018

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MicroRNAs coordinate an alternative splicing network during mouse postnatal heart development

21 January 2018

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MicroRNAs-10a and -10b contribute to retinoic acid-induced differentiation of neuroblastoma cells and target the alternative splicing regulatory factor SFRS1 (SF2/ASF).

21 January 2018

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MicroRNA (miRNA)-mediated interaction between leukemia/lymphoma-related factor (LRF) and alternative splicing factor/splicing factor 2 (ASF/SF2) affects mouse embryonic fibroblast senescence and apoptosis

21 January 2018

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Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila

21 January 2018

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The snoRNA MBII-52 (SNORD 115) is processed into smaller RNAs and regulates alternative splicing

21 January 2018

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Antisense transcription in the mammalian transcriptome

21 January 2018

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The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression

21 January 2018

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Extensive relationship between antisense transcription and alternative splicing in the human genome.

21 January 2018

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Argonaute-bound small RNAs from promoter-proximal RNA polymerase II

21 January 2018

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Emerging roles for natural microRNA sponges

21 January 2018

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miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA

21 January 2018

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Circular RNAs are abundant, conserved, and associated with ALU repeats

21 January 2018

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Circular RNAs are a large class of animal RNAs with regulatory potency

21 January 2018

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Pseudogene OCT4-pg4 functions as a natural micro RNA sponge to regulate OCT4 expression by competing for miR-145 in hepatocellular carcinoma

21 January 2018

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Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs.

21 January 2018

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Intronic microRNA precursors that bypass Drosha processing

21 January 2018

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Comparative analysis of argonaute-dependent small RNA pathways in Drosophila

21 January 2018

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A splicing-independent function of SF2/ASF in microRNA processing

21 January 2018

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Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis

21 January 2018

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Functional genomic analysis of RNA interference in C. elegans

21 January 2018

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Splicing factors facilitate RNAi-directed silencing in fission yeast

21 January 2018

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Involvement of the spliceosomal U4 small nuclear RNA in heterochromatic gene silencing at fission yeast centromeres

21 January 2018

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The splicing factor SR45 affects the RNA-directed DNA methylation pathway in Arabidopsis

21 January 2018

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The splicing machinery promotes RNA-directed DNA methylation and transcriptional silencing in Arabidopsis

21 January 2018

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Biogenic mechanisms and utilization of small RNAs derived from human protein-coding genes

21 January 2018

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Localization of pre-mRNA splicing in mammalian nuclei

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/WRNA.1264

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1 September 2017

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