(Q57634686)

Peter Refsing Andersen

3

0 references

Eivind Valen

Eivind Valen

1

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Albin Sandelin

Albin Sandelin

9

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Torben Heick Jensen

Torben Heick Jensen

10

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author name string

Pascal Preker

2

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Xiaobei Zhao

4

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Yun Chen

5

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Christine Ender

6

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Anne Dueck

7

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Gunter Meister

Nature Structural & Molecular Biology

8

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publication date

7 August 2011

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published in

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volume

18

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issue

9

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page(s)

1075-1082

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exact match

https://scigraph.springernature.com/pub.10.1038/nsmb.2091

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cites work

The complex eukaryotic transcriptome: unexpected pervasive transcription and novel small RNAs

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Whole genome transcriptome analysis.

21 January 2018

1 reference

Evolution, biogenesis and function of promoter-associated RNAs

21 January 2018

1 reference

Divergent transcription: a new feature of active promoters

21 January 2018

1 reference

RNA polymerase plays both sides: Vivid and bidirectional transcription around and upstream of active promoters

21 January 2018

1 reference

Pervasive transcription constitutes a new level of eukaryotic genome regulation

21 January 2018

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Origins and Mechanisms of miRNAs and siRNAs

21 January 2018

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MicroRNAs: target recognition and regulatory functions

21 January 2018

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Argonaute proteins: key players in RNA silencing

21 January 2018

1 reference

Argonaute proteins: mediators of RNA silencing

21 January 2018

1 reference

RNA maps reveal new RNA classes and a possible function for pervasive transcription

21 January 2018

1 reference

Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs

21 January 2018

1 reference

Divergent transcription from active promoters

21 January 2018

1 reference

Tiny RNAs associated with transcription start sites in animals.

21 January 2018

1 reference

Nuclear-localized tiny RNAs are associated with transcription initiation and splice sites in metazoans.

21 January 2018

1 reference

New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism

21 January 2018

1 reference

Limitations and possibilities of small RNA digital gene expression profiling.

21 January 2018

1 reference

Identification of a decay in transcription potential that results in elongation factor dependence of RNA polymerase II.

21 January 2018

1 reference

Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila

21 January 2018

1 reference

Mammalian RNA polymerase II core promoters: insights from genome-wide studies

21 January 2018

1 reference

Genome-wide analysis of mammalian promoter architecture and evolution

21 January 2018

1 reference

A chromatin landmark and transcription initiation at most promoters in human cells

21 January 2018

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RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

21 January 2018

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RNA polymerase is poised for activation across the genome

21 January 2018

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c-Myc regulates transcriptional pause release

21 January 2018

1 reference

Nucleosome organization in the Drosophila genome.

21 January 2018

1 reference

PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls

21 January 2018

1 reference

Structure-function studies of the RNA polymerase II elongation complex

21 January 2018

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The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila

21 January 2018

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Intronic microRNA precursors that bypass Drosha processing

21 January 2018

1 reference

MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila

21 January 2018

1 reference

Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs

21 January 2018

1 reference

A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness

21 January 2018

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NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila

21 January 2018

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The yeast 5'-3' exonuclease Rat1p functions during transcription elongation by RNA polymerase II.

21 January 2018

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21 January 2018

Mammalian mirtron genes

1 reference

A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach

21 January 2018

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Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection

21 January 2018

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Mammalian microRNAs: experimental evaluation of novel and previously annotated genes

21 January 2018

1 reference

Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans

21 January 2018

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miRBase: integrating microRNA annotation and deep-sequencing data

21 January 2018

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Evolutionary flux of canonical microRNAs and mirtrons in Drosophila

21 January 2018

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RNA secondary structure in mutually exclusive splicing.

21 January 2018

1 reference

Human branch point consensus sequence is yUnAy

21 January 2018

1 reference

Dicer-independent primal RNAs trigger RNAi and heterochromatin formation

21 January 2018

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Collapse of Germline piRNAs in the Absence of Argonaute3 Reveals Somatic piRNAs in Flies

21 January 2018

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Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary

21 January 2018

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A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila.

21 January 2018

1 reference

An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila

21 January 2018

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A broadly conserved pathway generates 3'UTR-directed primary piRNAs

21 January 2018

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RNA exosome depletion reveals transcription upstream of active human promoters

21 January 2018

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A human snoRNA with microRNA-like functions

21 January 2018

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A multifunctional human Argonaute2-specific monoclonal antibody

21 January 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 January 2018

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Model-based analysis of ChIP-Seq (MACS)

21 January 2018

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The widespread regulation of microRNA biogenesis, function and decay

21 January 2018

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PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters

31 March 2020

1 reference

Variation in the size of nascent RNA cleavage products as a function of transcript length and elongation competence

31 March 2020

1 reference

Direct detection of small RNAs using splinted ligation

31 March 2020

1 reference

Systematic clustering of transcription start site landscapes

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21822281

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The increment of SII-facilitated transcript cleavage varies dramatically between elongation competent and incompetent RNA polymerase II ternary complexes.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21822281

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RNA polymerase plays both sides: vivid and bidirectional transcription around and upstream of active promoters.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21822281