(Q38263750)

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Evidence against a genomic code for nucleosome positioning. Reply to "Nucleosome sequence preferences influence in vivo nucleosome organization.".

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Europe PubMed Central

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1 September 2017

Evidence against a genomic code for nucleosome positioning. Reply to "Nucleosome sequence preferences influence in vivo nucleosome organization.". (English)

1 reference

Europe PubMed Central

PMC publication ID

1 September 2017

1

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Europe PubMed Central

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1 September 2017

author name string

Zarmik Moqtaderi

2

1 reference

Europe PubMed Central

PMC publication ID

1 September 2017

Barbara P Rattner

3

1 reference

Europe PubMed Central

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1 September 2017

Ghia Euskirchen

4

1 reference

Europe PubMed Central

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1 September 2017

Michael Snyder

5

1 reference

Europe PubMed Central

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1 September 2017

James T Kadonaga

6

1 reference

Europe PubMed Central

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1 September 2017

X Shirley Liu

7

1 reference

Europe PubMed Central

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1 September 2017

Kevin Struhl

8

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Europe PubMed Central

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1 September 2017

publication date

1 August 2010

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Europe PubMed Central

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1 September 2017

Nature Structural & Molecular Biology

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Europe PubMed Central

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1 September 2017

17

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Europe PubMed Central

PMC publication ID

1 September 2017

8

1 reference

Europe PubMed Central

PMC publication ID

1 September 2017

920-923

1 reference

Europe PubMed Central

PMC publication ID

1 September 2017

High-resolution nucleosome mapping reveals transcription-dependent promoter packaging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Single-molecule imaging of DNA curtains reveals intrinsic energy landscapes for nucleosome deposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Evaluation of next generation sequencing platforms for population targeted sequencing studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

The DNA-encoded nucleosome organization of a eukaryotic genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Nucleosome positioning signals in genomic DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

A genomic code for nucleosome positioning

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Genome-scale identification of nucleosome positions in S. cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Nucleosome reconstitution on plasmid-inserted poly(dA) . poly(dT)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Statistical positioning of nucleosomes by specific protein-binding to an upstream activating sequence in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

6 September 2017

Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

14 September 2017

Sequence specific cleavage of DNA by micrococcal nuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

14 September 2017

A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

27 September 2017

Nucleosome sequence preferences influence in vivo nucleosome organization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

23 June 2018

DNA bending and its relation to nucleosome positioning.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

23 June 2018

Sequence periodicities in chicken nucleosome core DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

23 June 2018

Are nucleosome positions in vivo primarily determined by histone-DNA sequence preferences?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4742340

31 August 2018

Distinguishing between mechanisms of eukaryotic transcriptional activation with bacteriophage T7 RNA polymerase

1 reference

https://api.crossref.org/works/10.1038%2FNSMB0810-920

31 March 2020

Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast

1 reference

https://api.crossref.org/works/10.1038%2FNSMB0810-920

31 March 2020

Identifiers

10.1038/NSMB0810-920

1 reference

Europe PubMed Central

PMC publication ID

1 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

1 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

1 September 2017

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