(Q38284854)

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Assays for the biochemical and ultrastructural measurement of selective and nonselective types of autophagy in the yeast Saccharomyces cerevisiae

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scholarly article

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Europe PubMed Central

1 September 2017

Assays for the biochemical and ultrastructural measurement of selective and nonselective types of autophagy in the yeast Saccharomyces cerevisiae (English)

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Europe PubMed Central

1 September 2017

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Saccharomyces cerevisiae

1 reference

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inferred from title

Daniel J. Klionsky

3

object named as

Daniel J Klionsky

0 references

Elizabeth Delorme-Axford

2

object named as

Elizabeth Delorme-Axford

1 reference

Europe PubMed Central

1 September 2017

Fulvio Reggiori

object named as

Fulvio Reggiori

4

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author name string

Rodrigo Soares Guimaraes

1

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Europe PubMed Central

1 September 2017

publication date

5 December 2014

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Europe PubMed Central

1 September 2017

1 reference

Europe PubMed Central

1 September 2017

75

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Europe PubMed Central

1 September 2017

141-150

1 reference

Europe PubMed Central

1 September 2017

Protein turnover via autophagy: implications for metabolism

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

The role of Atg proteins in autophagosome formation

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

The autophagosome: origins unknown, biogenesis complex

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Autophagy in the eukaryotic cell

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Isolation of autophagocytosis mutants of Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

The Cvt pathway as a model for selective autophagy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Cargo proteins facilitate the formation of transport vesicles in the cytoplasm to vacuole targeting pathway

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Cvt19 is a receptor for the cytoplasm-to-vacuole targeting pathway.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Uth1p is involved in the autophagic degradation of mitochondria

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Aup1p, a yeast mitochondrial protein phosphatase homolog, is required for efficient stationary phase mitophagy and cell survival

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Atg32 is a mitochondrial protein that confers selectivity during mitophagy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Mitochondria-anchored receptor Atg32 mediates degradation of mitochondria via selective autophagy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Turnover of organelles by autophagy in yeast

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Piecemeal microautophagy of the nucleus requires the core macroautophagy genes.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Piecemeal microautophagy of nucleus in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A late form of nucleophagy in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Autophagy counterbalances endoplasmic reticulum expansion during the unfolded protein response

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Endoplasmic reticulum stress triggers autophagy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A sterol-enriched vacuolar microdomain mediates stationary phase lipophagy in budding yeast

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Lipid droplet autophagy in the yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Novel system for monitoring autophagy in the yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Structural characteristics of the PHO8 gene encoding repressible alkaline phosphatase in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Membrane protein sorting: biosynthesis, transport and processing of yeast vacuolar alkaline phosphatase

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A particulate form of alkaline phosphatase in the yeast, Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A gene controlling the synthesis of non specific alkaline phosphatase in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

The conserved oligomeric Golgi complex is involved in double-membrane vesicle formation during autophagy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Molecular characterization of a specific p-nitrophenylphosphatase gene, PHO13, and its mapping by chromosome fragmentation in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Monitoring autophagy in yeast: the Pho8Delta60 assay.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A ubiquitin-like system mediates protein lipidation

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Autophagosome formation: core machinery and adaptations

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Formation process of autophagosome is traced with Apg8/Aut7p in yeast

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Guidelines for the use and interpretation of assays for monitoring autophagy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Membrane recruitment of Aut7p in the autophagy and cytoplasm to vacuole targeting pathways requires Aut1p, Aut2p, and the autophagy conjugation complex

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Atg17 regulates the magnitude of the autophagic response

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Atg8, a ubiquitin-like protein required for autophagosome formation, mediates membrane tethering and hemifusion

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Quantification of nonselective bulk autophagy in S. cerevisiae using Pgk1-GFP.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Autophagic clearance of polyQ proteins mediated by ubiquitin-Atg8 adaptors of the conserved CUET protein family

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Ultrastructural analysis of the autophagic process in yeast: detection of autophagosomes and their characterization

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Analysis of the membrane structures involved in autophagy in yeast by freeze-replica method

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A multispecificity syntaxin homologue, Vam3p, essential for autophagic and biosynthetic protein transport to the vacuole

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A role for Atg8-PE deconjugation in autophagosome biogenesis

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Atg8 controls phagophore expansion during autophagosome formation

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A cryosectioning procedure for the ultrastructural analysis and the immunogold labelling of yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A sorting nexin PpAtg24 regulates vacuolar membrane dynamics during pexophagy via binding to phosphatidylinositol-3-phosphate

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Selective degradation of mitochondria by mitophagy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Vacuolar localization of oligomeric alpha-mannosidase requires the cytoplasm to vacuole targeting and autophagy pathway components in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Aminopeptidase I is targeted to the vacuole by a nonclassical vesicular mechanism

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Aspartyl aminopeptidase is imported from the cytoplasm to the vacuole by selective autophagy in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Selective autophagy regulates insertional mutagenesis by the Ty1 retrotransposon in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Identification of a cytoplasm to vacuole targeting determinant in aminopeptidase I

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Cvt9/Gsa9 functions in sequestering selective cytosolic cargo destined for the vacuole

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Apg13p and Vac8p are part of a complex of phosphoproteins that are required for cytoplasm to vacuole targeting

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Hrr25 triggers selective autophagy-related pathways by phosphorylating receptor proteins

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Mitophagy in yeast occurs through a selective mechanism

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Mitochondria removal by autophagy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Stationary-phase mitophagy in respiring Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Pexophagy: the selective autophagy of peroxisomes.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Autophagy in organelle homeostasis: peroxisome turnover

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Pex3-anchored Atg36 tags peroxisomes for degradation in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

The actin cytoskeleton is required for selective types of autophagy, but not nonspecific autophagy, in the yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Biochemical methods to monitor autophagy-related processes in yeast

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Cvt18/Gsa12 is required for cytoplasm-to-vacuole transport, pexophagy, and autophagy in Saccharomyces cerevisiae and Pichia pastoris

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Measuring piecemeal microautophagy of the nucleus in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

ER-phagy mediates selective degradation of endoplasmic reticulum independently of the core autophagy machinery

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Polar transmembrane domains target proteins to the interior of the yeast vacuole

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Fluorescence microscopy-based assays for monitoring yeast Atg protein trafficking.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

GFP-Atg8 protease protection as a tool to monitor autophagosome biogenesis

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Proteinase protection of prApe1 as a tool to monitor Cvt vesicle/autophagosome biogenesis

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

Two distinct pathways for targeting proteins from the cytoplasm to the vacuole/lysosome

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2014.11.023

7 January 2021

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10.1016/J.YMETH.2014.11.023

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Europe PubMed Central

1 September 2017

1 reference

Europe PubMed Central

1 September 2017

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