(Q38289471)

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Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods

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scholarly article

1 reference

Europe PubMed Central

1 September 2017

Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods (English)

1 reference

Europe PubMed Central

1 September 2017

Caenorhabditis elegans

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cis-regulatory element

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inferred from title

object named as

Thomas E Johnson

5

0 references

Gordon J. Lithgow

7

object named as

Gordon Lithgow

1 reference

Europe PubMed Central

1 September 2017

author name string

Debraj GuhaThakurta

1

1 reference

Europe PubMed Central

1 September 2017

Lisanne Palomar

2

1 reference

Europe PubMed Central

1 September 2017

Gary D Stormo

3

1 reference

Europe PubMed Central

1 September 2017

Pat Tedesco

4

1 reference

Europe PubMed Central

1 September 2017

David W Walker

6

1 reference

Europe PubMed Central

1 September 2017

Stuart Kim

8

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Europe PubMed Central

1 September 2017

Christopher D Link

9

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Europe PubMed Central

1 September 2017

language of work or name

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publication date

1 May 2002

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Europe PubMed Central

1 September 2017

Genome Research

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Europe PubMed Central

1 September 2017

12

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Europe PubMed Central

1 September 2017

701-712

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Europe PubMed Central

1 September 2017

5

1 reference

Europe PubMed Central

1 September 2017

Roles of the heat shock transcription factors in regulation of the heat shock response and beyond

1 reference

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6 September 2017

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes

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6 September 2017

VISTA : visualizing global DNA sequence alignments of arbitrary length

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6 September 2017

Analysing uncharted transcriptomes with SAGE.

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6 September 2017

Human and mouse gene structure: comparative analysis and application to exon prediction

1 reference

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6 September 2017

DNA binding sites: representation and discovery

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6 September 2017

Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae

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6 September 2017

TRANSFAC: an integrated system for gene expression regulation

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6 September 2017

New aspects in the vertebrate heat shock factor system: Hsf3 and Hsf4.

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6 September 2017

Direct visualization of the elt-2 gut-specific GATA factor binding to a target promoter inside the living Caenorhabditis elegans embryo

1 reference

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6 September 2017

Identifying DNA and protein patterns with statistically significant alignments of multiple sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=186591

6 September 2017

Heat shock factor function and regulation in response to cellular stress, growth, and differentiation signals

1 reference

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6 September 2017

Systematic determination of genetic network architecture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=186591

6 September 2017

Signal transducer and activator of transcription-1 and heat shock factor-1 interact and activate the transcription of the Hsp-70 and Hsp-90beta gene promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=186591

6 September 2017

Regulation of the heat shock transcriptional response: cross talk between a family of heat shock factors, molecular chaperones, and negative regulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=186591

6 September 2017

Exploring the metabolic and genetic control of gene expression on a genomic scale

1 reference

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6 September 2017

Identification and characterization of the gene encoding a new member of the alpha-crystallin/small hsp family, closely linked to the alphaB-crystallin gene in a head-to-head manner

1 reference

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6 September 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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6 September 2017

Transcriptional regulator of programmed cell death encoded by Caenorhabditis elegans gene ces-2.

1 reference

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6 September 2017

Heat shock transcription factors: structure and regulation

1 reference

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6 September 2017

Molecular chaperones in cellular protein folding

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6 September 2017

Cells in stress: transcriptional activation of heat shock genes

1 reference

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6 September 2017

Green fluorescent protein as a marker for gene expression

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6 September 2017

Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment

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6 September 2017

Thermotolerance and extended life-span conferred by single-gene mutations and induced by thermal stress

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6 September 2017

Rapid and efficient site-specific mutagenesis without phenotypic selection

1 reference

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6 September 2017

Isolation of the gene encoding the S. cerevisiae heat shock transcription factor

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6 September 2017

The heat-shock proteins

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6 September 2017

Methods for calculating the probabilities of finding patterns in sequences

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6 September 2017

The heat-shock response

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6 September 2017

Molecular cloning and expression of a hexameric Drosophila heat shock factor subject to negative regulation

1 reference

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6 September 2017

Sequence logos: a new way to display consensus sequences

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6 September 2017

Mechanisms of heat-shock gene activation in higher eukaryotes

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14 September 2017

Five promoters integrate control of the cob/pdu regulon in Salmonella typhimurium

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14 September 2017

Specificity, free energy and information content in protein-DNA interactions

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27 September 2017

The Hsf world: classification and properties of plant heat stress transcription factors

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27 September 2017

Identification of regulatory regions which confer muscle-specific gene expression.

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23 June 2018

Genomic cis-regulatory logic: experimental and computational analysis of a sea urchin gene

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Conservation of function and expression of unc-119 from two Caenorhabditis species despite divergence of non-coding DNA.

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A gut-to-pharynx/tail switch in embryonic expression of the Caenorhabditis elegans ges-1 gene centers on two GATA sequences.

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Functional elements and domains inferred from sequence comparisons of a heat shock gene in two nematodes.

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31 August 2018

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Human-mouse genome comparisons to locate regulatory sites

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Genes regulated cooperatively by one or more transcription factors and their identification in whole eukaryotic genomes

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Identifying target sites for cooperatively binding factors

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Identification and functional modelling of DNA sequence elements of transcription

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Structure, organization, and expression of the 16-kDa heat shock gene family of Caenorhabditis elegans

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Identifiers

10.1101/GR.228902

1 reference

Europe PubMed Central

1 September 2017

1 reference

Europe PubMed Central

1 September 2017

1 reference

Europe PubMed Central

1 September 2017

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