(Q38315719)

2 September 2017

The role of the cleavage site 2'-hydroxyl in the Tetrahymena group I ribozyme reaction (English)

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2 September 2017

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Yoshida A

1

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2 September 2017

Shan S

series ordinal

2

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2 September 2017

Herschlag D

series ordinal

3

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2 September 2017

Piccirilli JA

series ordinal

4

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2 September 2017

1 February 2000

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2 September 2017

Chemistry and Biology

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2 September 2017

7

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2 September 2017

85-96

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2 September 2017

2

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The importance of being ribose at the cleavage site in the Tetrahymena ribozyme reaction

2 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Effects of substrate structure on the kinetics of circle opening reactions of the self-splicing intervening sequence from Tetrahymena thermophila: evidence for substrate and Mg2+ binding interactions

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Dissection of the role of the conserved G.U pair in group I RNA self-splicing

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Exocyclic amine of the conserved G.U pair at the cleavage site of the Tetrahymena ribozyme contributes to 5'-splice site selection and transition state stabilization

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

A hydrogen-bonding triad stabilizes the chemical transition state of a group I ribozyme

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Metal ion interaction with cosubstrate in self-splicing of group I introns

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Kinetics for reaction of a circularized intervening sequence with CU, UCU, CUCU, and CUCUCU: mechanistic implications from the dependence on temperature and on oligomer and Mg2+ concentrations

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7 January 2021

Multiple magnesium ions in the ribonuclease P reaction mechanism

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7 January 2021

Probing the role of metal ions in RNA catalysis: kinetic and thermodynamic characterization of a metal ion interaction with the 2'-moiety of the guanosine nucleophile in the Tetrahymena group I ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Metal ion catalysis in the Tetrahymena ribozyme reaction

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

A second catalytic metal ion in group I ribozyme

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Three metal ions at the active site of the Tetrahymena group I ribozyme

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7 January 2021

A new metal ion interaction in the Tetrahymena ribozyme reaction revealed by double sulfur substitution

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7 January 2021

Mapping the transition state for ATP hydrolysis: implications for enzymatic catalysis

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base pairs

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Oligonucleotide duplexes containing 2'-amino-2'-deoxycytidines: thermal stability and chemical reactivity

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7 January 2021

pH dependencies of the Tetrahymena ribozyme reveal an unconventional origin of an apparent pKa.

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Visualizing the higher order folding of a catalytic RNA molecule

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7 January 2021

Defining the inside and outside of a catalytic RNA molecule

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Comparison of pH dependencies of the Tetrahymena ribozyme reactions with RNA 2'-substituted and phosphorothioate substrates reveals a rate-limiting conformational step

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Protonated 2'-aminoguanosine as a probe of the electrostatic environment of the active site of the Tetrahymena group I ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Ribozyme-catalyzed and nonenzymatic reactions of phosphate diesters: rate effects upon substitution of sulfur for a nonbridging phosphoryl oxygen atom

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Quantitating tertiary binding energies of 2' OH groups on the P1 duplex of the Tetrahymena ribozyme: intrinsic binding energy in an RNA enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Contributions of 2'-hydroxyl groups of the RNA substrate to binding and catalysis by the Tetrahymena ribozyme. An energetic picture of an active site composed of RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Interaction of manganese with fragments, complementary fragment recombinations, and whole molecules of yeast phenylalanine specific transfer RNA

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Proton NMR studies of manganese ion binding to tRNA-derived acceptor arm duplexes

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Structure and activity of the hairpin ribozyme in its natural junction conformation: effect of metal ions

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Ribozyme inhibitors: deoxyguanosine and dideoxyguanosine are competitive inhibitors of self-splicing of the Tetrahymena ribosomal ribonucleic acid precursor

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Guanosine binding required for cyclization of the self-splicing intervening sequence ribonucleic acid from Tetrahymena thermophila

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

The ionic hydrogen bond and ion solvation. 5- OH.cntdot..cntdot..cntdot.O- bonds. Gas-phase solvation and clustering of alkoxide and carboxylate anions

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Directionality of Hydrogen Bonds to Sulfur and Oxygen

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Use of binding energy by an RNA enzyme for catalysis by positioning and substrate destabilization

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Thermodynamics of proton dissociation in dilute aqueous solution. V. An entropy titration study of adenosine, pentoses, hexoses, and related compounds

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7 January 2021

Dissecting the catalytic triad of a serine protease

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Group II intron ribozymes that cleave DNA and RNA linkages with similar efficiency, and lack contacts with substrate 2'-hydroxyl groups

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Introns as mobile genetic elements

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Group II intron mobility in yeast mitochondria: target DNA-primed reverse transcription activity of aI1 and reverse splicing into DNA transposition sites in vitro.

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

A bacterial group II intron encoding reverse transcriptase, maturase, and DNA endonuclease activities: biochemical demonstration of maturase activity and insertion of new genetic information within the intron

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Mobile introns: retrohoming by complete reverse splicing

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https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Catalysis of RNA cleavage by a ribozyme derived from the group I intron of Anabaena pre-tRNA(Leu).

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Sequence-specific endoribonuclease activity of the Tetrahymena ribozyme: enhanced cleavage of certain oligonucleotide substrates that form mismatched ribozyme-substrate complexes

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Catalysis of RNA cleavage by the Tetrahymena thermophila ribozyme. 1. Kinetic description of the reaction of an RNA substrate complementary to the active site

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Guanosine binding to the Tetrahymena ribozyme: thermodynamic coupling with oligonucleotide binding

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Evidence for processivity and two-step binding of the RNA substrate from studies of J1/2 mutants of the Tetrahymena ribozyme

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

Dynamics of ribozyme binding of substrate revealed by fluorescence-detected stopped-flow methods

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

A minor groove RNA triple helix within the catalytic core of a group I intron

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2800%2900074-0

7 January 2021

10.1016/S1074-5521(00)00074-0

Identifiers

DOI

1 reference

2 September 2017

1 reference